RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 IL18RAPO95256 599 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 ACOT2P49753 483 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 LILRA4P59901 499 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 TNK2Q07912 1038 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 CCINQ13939 588 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
SF3A3-203ENST00000461869 IL31Q6EBC2 164 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 LRRC8AQ8IWT6 810 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 CCDC127Q96BQ5 260 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 SENP8Q96LD8 212 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 PANX2Q96RD6 677 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 LSM14BQ9BX40 385 aaKnown RBP16.53■□□□□ 0.24
SF3A3-203ENST00000461869 TTYH3Q9C0H2 523 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 NUCKS1Q9H1E3 243 aaKnown RBP16.53■□□□□ 0.24
SF3A3-203ENST00000461869 TASP1Q9H6P5 420 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 RPF1Q9H9Y2 349 aaKnown RBP16.53■□□□□ 0.24
SF3A3-203ENST00000461869 HSFX1Q9UBD0 423 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 CPSF3Q9UKF6 684 aaKnown RBP16.53■□□□□ 0.24
SF3A3-203ENST00000461869 CAPN11Q9UMQ6 739 aa16.53■□□□□ 0.24
SF3A3-203ENST00000461869 LUC7L2Q9Y383 392 aaKnown RBP16.53■□□□□ 0.24
SF3A3-203ENST00000461869 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 LRRIQ3A6PVS8 624 aaPredicted RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 PPEF2O14830 753 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 FAM189A1O60320 539 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 PRAMEF12O95522 483 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 ODC1P11926 461 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 WEE1P30291 646 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 CASP14P31944 242 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 CLDN10P78369 228 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 ENOX2Q16206 610 aaKnown RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 AASDHQ4L235 1098 aaPredicted RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 KRT39Q6A163 491 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 CRELD2Q6UXH1 353 aaPredicted RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 CACNA2D4Q7Z3S7 1137 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 FMNL3Q8IVF7 1028 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 ZSWIM2Q8NEG5 633 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 FAM212AQ96EL1 285 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 TSPAN18Q96SJ8 248 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 CGRRF1Q99675 332 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 SEPT5Q99719 369 aaPredicted RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 LPIN3Q9BQK8 851 aa16.52■□□□□ 0.24
SF3A3-203ENST00000461869 NAA15Q9BXJ9 866 aaKnown RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 FAM207AQ9NSI2 230 aaPredicted RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 THG1LQ9NWX6 298 aaKnown RBP16.52■□□□□ 0.24
SF3A3-203ENST00000461869 DLATP10515 647 aaKnown RBP16.51■□□□□ 0.23
SF3A3-203ENST00000461869 TNNI1P19237 187 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CDC25CP30307 473 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 GCLMP48507 274 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 TUFMP49411 452 aaKnown RBP16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CDR1P51861 262 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 DLG4P78352 724 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 ZBED6P86452 979 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CYP4F8P98187 520 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 KCNMA1Q12791 1236 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 VEPH1Q14D04 833 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 SF3A2Q15428 464 aaKnown RBP16.51■□□□□ 0.23
SF3A3-203ENST00000461869 ITPRIPL2Q3MIP1 535 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 MGAT5BQ3V5L5 792 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CBWD6Q4V339 395 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CBWD3Q5JTY5 395 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CBWD5Q5RIA9 395 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 WDR49Q8IV35 697 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 TC2NQ8N9U0 490 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 C12orf50Q8NA57 414 aaPredicted RBP16.51■□□□□ 0.23
SF3A3-203ENST00000461869 OR10T2Q8NGX3 314 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CACTINQ8WUQ7 758 aaKnown RBP16.51■□□□□ 0.23
SF3A3-203ENST00000461869 GCNAQ96QF7 691 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CRACR2AQ9BSW2 395 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 SMG9Q9H0W8 520 aaKnown RBP16.51■□□□□ 0.23
SF3A3-203ENST00000461869 ARRDC1-AS1Q9H2J1 176 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 ABHD10Q9NUJ1 306 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
SF3A3-203ENST00000461869 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
SF3A3-203ENST00000461869 CACNA1BQ00975 2339 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 RPP40O75818 363 aaKnown RBP16.5■□□□□ 0.23
SF3A3-203ENST00000461869 PAX3P23760 479 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 PON1P27169 355 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 KRT9P35527 623 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 PXNP49023 591 aaPredicted RBP16.5■□□□□ 0.23
SF3A3-203ENST00000461869 KLK7P49862 253 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 LIMK1P53667 647 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 ARID5BQ14865 1188 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 CCDC6Q16204 474 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 TAF12Q16514 161 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 SLC39A12Q504Y0 691 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 C1orf220Q5T0J3 134 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 C9orf57Q5W0N0 161 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 JADE1Q6IE81 842 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 TRIM65Q6PJ69 517 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 CD302Q8IX05 232 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 OR8K1Q8NGG5 319 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 CPLX3Q8WVH0 158 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 GAB3Q8WWW8 586 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 LOXL4Q96JB6 756 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 SLC46A2Q9BY10 475 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 GKN1Q9NS71 199 aa16.5■□□□□ 0.23
SF3A3-203ENST00000461869 ZNHIT6Q9NWK9 470 aaKnown RBP16.5■□□□□ 0.23
SF3A3-203ENST00000461869 MYO6Q9UM54 1294 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms