RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 TRIAP1O43715 76 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 RRP9O43818 475 aaKnown RBP4.48□□□□□ -1.69
CLK1-206ENST00000461326 PIP5K1CO60331 668 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 VPS4BO75351 444 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 SUN1O94901 812 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 SCAF4O95104 1147 aaKnown RBP4.48□□□□□ -1.69
CLK1-206ENST00000461326 FGAP02671 866 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 PTDSS1P48651 473 aaKnown RBP4.48□□□□□ -1.69
CLK1-206ENST00000461326 TOB1P50616 345 aaPredicted RBP4.48□□□□□ -1.69
CLK1-206ENST00000461326 RNASE9P60153 205 aaKnown RBP4.48□□□□□ -1.69
CLK1-206ENST00000461326 HSD11B2P80365 405 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 PTK2BQ14289 1009 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 NPY5RQ15761 445 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 RAB30Q15771 203 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 MAPKAPK3Q16644 382 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 PFKFB4Q16877 469 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 SLC5A9Q2M3M2 681 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 TUBB8Q3ZCM7 444 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 PLAG1Q6DJT9 500 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 FCRL6Q6DN72 434 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 TAF2Q6P1X5 1199 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 FBXO42Q6P3S6 717 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 CCDC174Q6PII3 467 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 COLGALT2Q8IYK4 626 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 FAM71BQ8TC56 605 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 SNX19Q92543 992 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 EID2BQ96D98 161 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 BOD1Q96IK1 185 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 PAGR1Q9BTK6 254 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 TMEM120AQ9BXJ8 343 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 ZBTB26Q9HCK0 441 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 TBC1D23Q9NUY8 699 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 DACT1Q9NYF0 836 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 HSFX1Q9UBD0 423 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 DKK4Q9UBT3 224 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 NOX1Q9Y5S8 564 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 DGKBQ9Y6T7 804 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 MARCH11A6NNE9 402 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 NPC1O15118 1278 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 PIAS2O75928 621 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 ITGA5P08648 1049 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 SERPINF1P36955 418 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 NPTX2P47972 431 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 NDUFV1P49821 464 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 DGKEP52429 567 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 LILRA4P59901 499 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 CXADRP78310 365 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 NSUN2Q08J23 767 aaKnown RBP eCLIP4.47□□□□□ -1.69
CLK1-206ENST00000461326 DYRK1AQ13627 763 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 E2F2Q14209 437 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 SPARCL1Q14515 664 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 ZNF750Q32MQ0 723 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 PDCD4Q53EL6 469 aaKnown RBP4.47□□□□□ -1.69
CLK1-206ENST00000461326 CERCAMQ5T4B2 595 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 FAXCQ5TGI0 409 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 CACHD1Q5VU97 1274 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 SP5Q6BEB4 398 aaPredicted RBP4.47□□□□□ -1.69
CLK1-206ENST00000461326 LDHAL6AQ6ZMR3 332 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 ANKRD18AQ8IVF6 992 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 SPARTQ8N0X7 666 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 MYCT1Q8N699 235 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 GLIS1Q8NBF1 620 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 MYEOVQ96EZ4 313 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.47□□□□□ -1.69
CLK1-206ENST00000461326 GALNT9Q9HCQ5 603 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 TMEM74BQ9NUR3 256 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 TRPM5Q9NZQ8 1165 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 TMOD4Q9NZQ9 345 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 DNMT3BQ9UBC3 853 aaKnown RBP4.47□□□□□ -1.69
CLK1-206ENST00000461326 GTF2A1LQ9UNN4 478 aa4.47□□□□□ -1.69
CLK1-206ENST00000461326 AATKQ6ZMQ8 1374 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 A0A087WZ62 844 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 A0A0B4J269 797 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 CENPVL1A0A0U1RR11 272 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 H7C4K7 107 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 ACKR2O00590 384 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 ZNF185O15231 689 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 IRAK2O43187 625 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 COQ9O75208 318 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 NDST3O95803 873 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 C1RP00736 705 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 CHRM3P20309 590 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 KCNA3P22001 575 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 CTGFP29279 349 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 CD6P30203 668 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 ZEB1P37275 1124 aaPredicted RBP4.46□□□□□ -1.7
CLK1-206ENST00000461326 RENBPP51606 427 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 PRKAG1P54619 331 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 GALNT1Q10472 559 aaPredicted RBP4.46□□□□□ -1.7
CLK1-206ENST00000461326 MYO1EQ12965 1108 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 PPFIA1Q13136 1202 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 TUBB3Q13509 450 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 PRKG1Q13976 671 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 TRIM71Q2Q1W2 868 aaKnown RBP4.46□□□□□ -1.7
CLK1-206ENST00000461326 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.46□□□□□ -1.7
CLK1-206ENST00000461326 RRAGBQ5VZM2 374 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 ICE2Q659A1 982 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 TANGO2Q6ICL3 276 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 CRTC1Q6UUV9 634 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 ZDHHC24Q6UX98 284 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms