RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MDM1Q8TC05 714 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 CAMK1GQ96NX5 476 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 REEP2Q9BRK0 252 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 EHD2Q9NZN4 543 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 AGO2Q9UKV8 859 aaKnown RBP18.43■□□□□ 0.54
TOP3A-202ENST00000461127 RAXQ9Y2V3 346 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 URB1O60287 2271 aaKnown RBP18.42■□□□□ 0.54
TOP3A-202ENST00000461127 A0A0A0MRY4 1105 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 TRAK2O60296 914 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 ZIC2O95409 532 aaPredicted RBP18.42■□□□□ 0.54
TOP3A-202ENST00000461127 TOB1P50616 345 aaPredicted RBP18.42■□□□□ 0.54
TOP3A-202ENST00000461127 ARSHQ5FYA8 562 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 C4orf50Q6ZRC1 276 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 NUDT18Q6ZVK8 323 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 NAXDQ8IW45 347 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 SFTPA1Q8IWL2 248 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 PNPLA1Q8N8W4 532 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 FAM184AQ8NB25 1140 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 KCNV2Q8TDN2 545 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 INTS4Q96HW7 963 aaKnown RBP18.42■□□□□ 0.54
TOP3A-202ENST00000461127 PNMA5Q96PV4 448 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 FAM124BQ9H5Z6 455 aaPredicted RBP18.42■□□□□ 0.54
TOP3A-202ENST00000461127 SUSD2Q9UGT4 822 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 L1RE1Q9UN81 338 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 ASXL3Q9C0F0 2248 aa18.42■□□□□ 0.54
TOP3A-202ENST00000461127 ASH1LQ9NR48 2969 aaKnown RBP18.42■□□□□ 0.54
TOP3A-202ENST00000461127 TULP1O00294 542 aaPredicted RBP18.41■□□□□ 0.54
TOP3A-202ENST00000461127 ZNF217O75362 1048 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 ADH5P11766 374 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 GNSP15586 552 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 POLR2BP30876 1174 aaKnown RBP18.41■□□□□ 0.54
TOP3A-202ENST00000461127 MAGEA11P43364 429 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 LHX1P48742 406 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 SLC7A9P82251 487 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 HMGN5P82970 282 aaKnown RBP18.41■□□□□ 0.54
TOP3A-202ENST00000461127 KDSRQ06136 332 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 PLEKHG6Q3KR16 790 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 SYCP2LQ5T4T6 812 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 RGL4Q8IZJ4 473 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 SPATA17Q96L03 361 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 CEP295NLQ96MC4 621 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 BBC3Q96PG8 261 aaPredicted RBP18.41■□□□□ 0.54
TOP3A-202ENST00000461127 PKMYT1Q99640 499 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 LLPHQ9BRT6 129 aaKnown RBP18.41■□□□□ 0.54
TOP3A-202ENST00000461127 ZHX3Q9H4I2 956 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 ZDHHC4Q9NPG8 344 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 AGAP1Q9UPQ3 857 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
TOP3A-202ENST00000461127 CELSR3Q9NYQ7 3312 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 TBC1D3BA6NDS4 549 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 ANKRD63C9JTQ0 380 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 KRT18P05783 430 aaKnown RBP18.4■□□□□ 0.54
TOP3A-202ENST00000461127 CHRM1P11229 460 aaPredicted RBP18.4■□□□□ 0.54
TOP3A-202ENST00000461127 ANXA13P27216 316 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 PPP3CCP48454 512 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 ZXDBP98169 803 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 TFAMQ00059 246 aaKnown RBP18.4■□□□□ 0.54
TOP3A-202ENST00000461127 GTF2BQ00403 316 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 MESP2Q0VG99 397 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 ST3GAL1Q11201 340 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 BTBD8Q5XKL5 378 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 VSTM1Q6UX27 236 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 DENND5BQ6ZUT9 1274 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 GPBP1Q86WP2 473 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 DDX42Q86XP3 938 aaKnown RBP eCLIP18.4■□□□□ 0.54
TOP3A-202ENST00000461127 ZNF513Q8N8E2 541 aaPredicted RBP18.4■□□□□ 0.54
TOP3A-202ENST00000461127 HSPA12BQ96MM6 686 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 CALCOCO1Q9P1Z2 691 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 TBC1D14Q9P2M4 693 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 MAGEC2Q9UBF1 373 aaPredicted RBP18.4■□□□□ 0.54
TOP3A-202ENST00000461127 CPQQ9Y646 472 aa18.4■□□□□ 0.54
TOP3A-202ENST00000461127 PLXNB3Q9ULL4 1909 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 MYOFQ9NZM1 2061 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 TBCAO75347 108 aaKnown RBP18.39■□□□□ 0.53
TOP3A-202ENST00000461127 GJB3O75712 270 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 ITGB3P05106 788 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 GABRG2P18507 467 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 GRIK1P39086 918 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 ZNF131P52739 623 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 RHBDF2Q6PJF5 856 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 TOGARAM2Q6ZUX3 1019 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 C12orf40Q86WS4 652 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 ADGRF2Q8IZF7 708 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 TRIML1Q8N9V2 468 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 CACTINQ8WUQ7 758 aaKnown RBP18.39■□□□□ 0.53
TOP3A-202ENST00000461127 POMGNT1Q8WZA1 660 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 ZDHHC5Q9C0B5 715 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 SMPD4Q9NXE4 827 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 CFAP97Q9P2B7 532 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 DKK4Q9UBT3 224 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 SNX9Q9Y5X1 595 aa18.39■□□□□ 0.53
TOP3A-202ENST00000461127 IGHV1OR15-9A0A0B4J2B8 117 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 NDUFS2O75306 463 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 ABL1P00519 1130 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 HOXB2P14652 356 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 GAD2Q05329 585 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 DHX8Q14562 1220 aaKnown RBP18.38■□□□□ 0.53
TOP3A-202ENST00000461127 POSTNQ15063 836 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 MAPRE1Q15691 268 aaKnown RBP18.38■□□□□ 0.53
TOP3A-202ENST00000461127 CCDC142Q17RM4 750 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms