RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PCED1BQ96HM7 432 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 FAM81BQ96LP2 452 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 HINFPQ9BQA5 517 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MED10Q9BTT4 135 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 FAM126AQ9BYI3 521 aaPredicted RBP14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ELOVL4Q9GZR5 314 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 DPEP3Q9H4B8 488 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 KIF9Q9HAQ2 790 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 LMAN1LQ9HAT1 526 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CISHQ9NSE2 258 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SAMSN1Q9NSI8 373 aaKnown RBP14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 R4GN57 208 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NRG2O14511 850 aaPredicted RBP14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CILPO75339 1184 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CDK11BP21127 795 aaKnown RBP14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PDE6CP51160 858 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MYL5Q02045 173 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 LRMPQ12912 555 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 DDR2Q16832 855 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TCP11X2Q5H9J9 407 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 C11orf57Q6ZUT1 292 aaPredicted RBP14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PPM1KQ8N3J5 372 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MAB21L3Q8N8X9 362 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SECISBP2LQ93073 1101 aaKnown RBP14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TRMT2BQ96GJ1 504 aaKnown RBP14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SPATA17Q96L03 361 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 HEXIM2Q96MH2 286 aaKnown RBP14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SLC46A2Q9BY10 475 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NDST4Q9H3R1 872 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 IL21Q9HBE4 155 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ZSCAN32Q9NX65 697 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NME7Q9Y5B8 376 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PCDHGA2Q9Y5H1 932 aa14.04□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PTPRDP23468 1912 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SLC38A8A6NNN8 435 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PES1O00541 588 aaKnown RBP14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NOL4O94818 638 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 F11P03951 625 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 HMGA1P17096 107 aaKnown RBP14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CCR3P51677 355 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 EXOC3L4Q17RC7 722 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ITPRIPL2Q3MIP1 535 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ANO6Q4KMQ2 910 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 VWA3BQ502W6 1294 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 HSP90AA4PQ58FG1 418 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 DGKKQ5KSL6 1271 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MAMSTRQ6ZN01 415 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MON1AQ86VX9 555 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 LMO3Q8TAP4 145 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 JAKMIP2Q96AA8 810 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SMARCD1Q96GM5 515 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TMEM176AQ96HP8 235 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 C8orf48Q96LL4 319 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 BPIFA3Q9BQP9 254 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 B3GNT5Q9BYG0 378 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 INTS2Q9H0H0 1204 aaKnown RBP14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CHRDQ9H2X0 955 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TDP1Q9NUW8 608 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 FANCLQ9NW38 375 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 GCNT4Q9P109 453 aa14.03□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TRAV19A0A0A6YYK7 116 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SPECC1L-ADORA2AF8WAN1 911 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ARNTLO00327 626 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CLDN5O00501 218 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 USP17L7P0C7H9 530 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GPR15P49685 360 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 MFAP3P55082 362 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GCNT1Q02742 428 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 MTAPQ13126 283 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZNF394Q53GI3 561 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SDHAF4Q5VUM1 108 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TXNDC8Q6A555 127 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ENOSF1Q7L5Y1 443 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RSPRY1Q96DX4 576 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CYFIP2Q96F07 1278 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 MYRFLQ96LU7 910 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CRACR2AQ9BSW2 395 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TRPC7Q9HCX4 862 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 UBE2TQ9NPD8 197 aaPredicted RBP14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 HMGXB4Q9UGU5 601 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 KIAA1257Q9ULG3 409 aa14.02□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SYCE3A1L190 88 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 BECN2A8MW95 431 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 F8VP50 259 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 AP1G2O75843 785 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PRAMEF12O95522 483 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CAVIN2O95810 425 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CXCL12P48061 93 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PPP3CCP48454 512 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZNF165P49910 485 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ORC1Q13415 861 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZNF268Q14587 947 aaPredicted RBP14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CCDC142Q17RM4 750 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FKBP15Q5T1M5 1219 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CDKAL1Q5VV42 579 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TRIM65Q6PJ69 517 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 DENND5BQ6ZUT9 1274 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RRAGAQ7L523 313 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FAM35AQ86V20 835 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 MAML2Q8IZL2 1156 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms