RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SYT10Q6XYQ8 523 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 DENND5BQ6ZUT9 1274 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 NPAS3Q8IXF0 933 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 DRC7Q8IY82 874 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 GJD3Q8N144 294 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 ITFG1Q8TB96 612 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 SHC3Q92529 594 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 LSM14BQ9BX40 385 aaKnown RBP11.72□□□□□ -0.53
APTX-209ENST00000460940 CSNK1G1Q9HCP0 422 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 ARGLU1Q9NWB6 273 aaPredicted RBP11.72□□□□□ -0.53
APTX-209ENST00000460940 SOBPA7XYQ1 873 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 RTN3O95197 1032 aaPredicted RBP11.72□□□□□ -0.53
APTX-209ENST00000460940 KRT5P13647 590 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 CD19P15391 556 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 NPR3P17342 541 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 ADORA2BP29275 332 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 SSTR3P32745 418 aaPredicted RBP11.72□□□□□ -0.53
APTX-209ENST00000460940 CACNA2D1P54289 1103 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 SLC8A3P57103 927 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 KCNMA1Q12791 1236 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 FILIP1LQ4L180 1135 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 ARHGAP15Q53QZ3 475 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 KLHDC7AQ5VTJ3 777 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 SDHAF4Q5VUM1 108 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 SARM1Q6SZW1 724 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 LUZP1Q86V48 1076 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 SHKBP1Q8TBC3 707 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 GPR152Q8TDT2 470 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 FGF13Q92913 245 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 ERGIC2Q96RQ1 377 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 MYADMQ96S97 322 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 TTLL2Q9BWV7 592 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 GPR88Q9GZN0 384 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 ZNF334Q9HCZ1 680 aaPredicted RBP11.72□□□□□ -0.53
APTX-209ENST00000460940 TMEM30AQ9NV96 361 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 COMMD8Q9NX08 183 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 NOTCH4Q99466 2003 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 LAMP2P13473 410 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 CEBPBP17676 345 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 SP100P23497 879 aaPredicted RBP11.71□□□□□ -0.53
APTX-209ENST00000460940 DDX6P26196 483 aaKnown RBP eCLIP11.71□□□□□ -0.53
APTX-209ENST00000460940 GABRR2P28476 465 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 CCR2P41597 374 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 CLCN6P51797 869 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 UBXN1Q04323 297 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 MEA1Q16626 185 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 PPP1R26Q5T8A7 1209 aaPredicted RBP11.71□□□□□ -0.53
APTX-209ENST00000460940 DPY19L2P1Q6NXN4 242 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 GJB7Q6PEY0 223 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 CLEC20AQ6ZU45 233 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 MTSS1LQ765P7 747 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 NXPE3Q969Y0 559 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 TCEAL4Q96EI5 215 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 NECAB3Q96P71 396 aaPredicted RBP11.71□□□□□ -0.53
APTX-209ENST00000460940 SMOQ99835 787 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 DUSP16Q9BY84 665 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 IL21Q9HBE4 155 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 HESX1Q9UBX0 185 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 DNAJC12Q9UKB3 198 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 SIK3Q9Y2K2 1263 aa11.71□□□□□ -0.53
APTX-209ENST00000460940 TCF20Q9UGU0 1960 aaKnown RBP11.7□□□□□ -0.54
APTX-209ENST00000460940 A0A1W2PRU2 124 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 O00370 1275 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 MOSPD3O75425 235 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 UCHL3P15374 230 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 PPP3CCP48454 512 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 BCAT1P54687 386 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 MAP3K7CLP57077 242 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 APBA1Q02410 837 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 MTMR3Q13615 1198 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 ARHGAP44Q17R89 818 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 GOLGA7BQ2TAP0 167 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 LCLAT1Q6UWP7 414 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 GAREM2Q75VX8 874 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 SRLQ86TD4 932 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 LRRC8AQ8IWT6 810 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 NUP93Q8N1F7 819 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 ZMIZ2Q8NF64 920 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 ING5Q8WYH8 240 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 OVCA2Q8WZ82 227 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 NAA15Q9BXJ9 866 aaKnown RBP11.7□□□□□ -0.54
APTX-209ENST00000460940 TRIM5Q9C035 493 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 ATXN3LQ9H3M9 355 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 IGSF9Q9P2J2 1179 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 TSPAN16Q9UKR8 245 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 MAGED2Q9UNF1 606 aaPredicted RBP11.7□□□□□ -0.54
APTX-209ENST00000460940 NCANO14594 1321 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 A0A1B0GTH6 734 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 TNFRSF10BO14763 440 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 MED7O43513 233 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 F11P03951 625 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 SETSIPP0DME0 302 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 SLC5A3P53794 718 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 BST2Q10589 180 aaKnown RBP11.7□□□□□ -0.54
APTX-209ENST00000460940 TEAD2Q15562 447 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 CNGA2Q16280 664 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 ZSCAN26Q16670 478 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms