RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 RPAINQ86UA6 219 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 RBM12BQ8IXT5 1001 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 PDCL2Q8N4E4 241 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ANKRD13CQ8N6S4 541 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 Q8TCH9 128 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 CD99L2Q8TCZ2 262 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 SLC39A13Q96H72 371 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 TEKT5Q96M29 485 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 LRGUKQ96M69 825 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ACAP3Q96P50 834 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 MPHOSPH6Q99547 160 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 UBAC1Q9BSL1 405 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 C22orf23Q9BZE7 217 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 KRT23Q9C075 422 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 KATNBL1Q9H079 304 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ZNF700Q9H0M5 742 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 PORCNQ9H237 461 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 VPS11Q9H270 941 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 RNF41Q9H4P4 317 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ANLNQ9NQW6 1124 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 CCM2LQ9NUG4 571 aaPredicted RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 CGNQ9P2M7 1197 aaKnown RBP5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 MSRAQ9UJ68 235 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ZFP69BQ9UJL9 534 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 RIPK3Q9Y572 518 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 COMMD10Q9Y6G5 202 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 ADGRA2Q96PE1 1338 aa5.39□□□□□ -1.55
ATPAF1-203ENST00000460928 KLF18A0A0U1RQI7 1052 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 FAM90A27PA6NNH2 459 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ZNF839A8K0R7 811 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 C19orf81C9J6K1 198 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ADAMTS3O15072 1205 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 SLPIP03973 132 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 PDHBP11177 359 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ZKSCAN1P17029 563 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 SDHAP31040 664 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 GJA4P35212 333 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 SLC1A4P43007 532 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 HERVK_113P62684 666 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ADCY1Q08828 1119 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ZNF543Q08ER8 600 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 IKQ13123 557 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 STK3Q13188 491 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 PLS1Q14651 629 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 WTAPQ15007 396 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 BRD3Q15059 726 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ARHGAP29Q52LW3 1261 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 IFIT1BQ5T764 474 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 BLOC1S2Q6QNY1 142 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 C17orf99Q6UX52 265 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 TSHZ1Q6ZSZ6 1077 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 RUFY3Q7L099 469 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 FASTKD5Q7L8L6 764 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 MICU3Q86XE3 530 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 PALM2Q8IXS6 379 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 CPXCR1Q8N123 301 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 DEFB123Q8N688 67 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 SAMD3Q8N6K7 520 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 NECAB1Q8N987 351 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 TBC1D5Q92609 795 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 JADE3Q92613 823 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ANKS1AQ92625 1134 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 TIFAQ96CG3 184 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 C16orf92Q96LL3 132 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 C12orf42Q96LP6 360 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 AIFM3Q96NN9 605 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 KAT14Q9H8E8 782 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 GRPEL1Q9HAV7 217 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ZNF287Q9HBT7 754 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 RAVER2Q9HCJ3 691 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 TCP11L1Q9NUJ3 509 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 RIC8BQ9NVN3 520 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 DONSONQ9NYP3 566 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 USP36Q9P275 1121 aaKnown RBP5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 ARHGAP20Q9P2F6 1191 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 MAD2L2Q9UI95 211 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 TELO2Q9Y4R8 837 aa5.38□□□□□ -1.55
ATPAF1-203ENST00000460928 WDR46O15213 610 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 CYTH3O43739 400 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 TLR2O60603 784 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 ZRANB2O95218 330 aaKnown RBP eCLIP5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 PGK2P07205 417 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 PTPN1P18031 435 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 EN2P19622 333 aaPredicted RBP5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 HOXA7P31268 230 aaPredicted RBP5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 FNTBP49356 437 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 HMGA2P52926 109 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 USP14P54578 494 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 AK2P54819 239 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 PURAQ00577 322 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 PFKPQ01813 784 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 ST3GAL1Q11201 340 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 TROAPQ12815 778 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 COG2Q14746 738 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 GRM4Q14833 912 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 EPHA7Q15375 998 aa5.37□□□□□ -1.55
ATPAF1-203ENST00000460928 FSCN1Q16658 493 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 344.1 ms