RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 ARID3BQ8IVW6 561 aaPredicted RBP21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 UBALD2Q8IYN6 164 aa21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 MRPS31Q92665 395 aaKnown RBP21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 RSPRY1Q96DX4 576 aa21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 CBX8Q9HC52 389 aa21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 ZFP14Q9HCL3 533 aa21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 DNAJC12Q9UKB3 198 aa21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 TSPAN16Q9UKR8 245 aa21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 DUSP12Q9UNI6 340 aa21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 TECTAO75443 2155 aa21.8■■□□□ 1.08
RPUSD3-210ENST00000460909 VIPR2P41587 438 aa21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 ARHGAP44Q17R89 818 aa21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 GOLGA7BQ2TAP0 167 aa21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 KLHDC7AQ5VTJ3 777 aa21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 CMTM8Q8IZV2 173 aa21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 MAB21L3Q8N8X9 362 aa21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 ANKRD20A12PQ8NF67 263 aa21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 NAA15Q9BXJ9 866 aaKnown RBP21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 UBXN6Q9BZV1 441 aa21.79■■□□□ 1.08
RPUSD3-210ENST00000460909 ZNF840PA6NDX5 716 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 LGALS16A8MUM7 142 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 PRAMEF12O95522 483 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 TPM2P07951 284 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 KRT5P13647 590 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 PPP3CCP48454 512 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 IFRD2Q12894 506 aaPredicted RBP21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 CNGA2Q16280 664 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 LCLAT1Q6UWP7 414 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 GPIHBP1Q8IV16 184 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 OVCA2Q8WZ82 227 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 LRRC3BQ96PB8 259 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 SLITRK1Q96PX8 696 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 SLC22A12Q96S37 553 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 C11orf16Q9NQ32 467 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 PLCB1Q9NQ66 1216 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 TRPM5Q9NZQ8 1165 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 SIK3Q9Y2K2 1263 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 FHOD1Q9Y613 1164 aa21.78■■□□□ 1.08
RPUSD3-210ENST00000460909 C2orf78A6NCI8 922 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 TULP2O00295 520 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 CAVIN2O95810 425 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 ZDHHC11BP0C7U3 371 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 SRFP11831 508 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 BRD2P25440 801 aaKnown RBP21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 KLK7P49862 253 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 KIF11P52732 1056 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 BCAT1P54687 386 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 PDE4CQ08493 712 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 SNX30Q5VWJ9 437 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 VITQ6UXI7 678 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 TRIM67Q6ZTA4 783 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 PIGZQ86VD9 579 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 FBXO32Q969P5 355 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 LSM14BQ9BX40 385 aaKnown RBP21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 FBXO44Q9H4M3 255 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 ACP6Q9NPH0 428 aa21.77■■□□□ 1.08
RPUSD3-210ENST00000460909 HEPACAM2A8MVW5 462 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 FOXN3O00409 490 aaPredicted RBP21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 UCHL3P15374 230 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 PGFP49763 221 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 SIGLEC14Q08ET2 396 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 STILQ15468 1287 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 RAB41Q5JT25 222 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 FKBP15Q5T1M5 1219 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 LUZP1Q86V48 1076 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 UBA3Q8TBC4 463 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 E2F7Q96AV8 911 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 ASIC4Q96FT7 647 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 ERGIC2Q96RQ1 377 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 CYP2S1Q96SQ9 504 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 SMG9Q9H0W8 520 aaKnown RBP21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 GANQ9H2C0 597 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 SLC2A4RGQ9NR83 387 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 HESX1Q9UBX0 185 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 CHORDC1Q9UHD1 332 aaPredicted RBP21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 SCML2Q9UQR0 700 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 USP3Q9Y6I4 520 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 MYO16Q9Y6X6 1858 aa21.76■■□□□ 1.07
RPUSD3-210ENST00000460909 XPO1O14980 1071 aaKnown RBP21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 OLFM2O95897 454 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 RFX1P22670 979 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 GPC5P78333 572 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 BST2Q10589 180 aaKnown RBP21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 MFSD6LQ8IWD5 586 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 FAM71AQ8IYT1 594 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 PDZD8Q8NEN9 1154 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 SLC35F5Q8WV83 523 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 USP13Q92995 863 aaPredicted RBP21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 TRPC7Q9HCX4 862 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 OBP2AQ9NY56 170 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 GMIPQ9P107 970 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 CCL26Q9Y258 94 aa21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 KIF26AQ9ULI4 1882 aaPredicted RBP21.75■■□□□ 1.07
RPUSD3-210ENST00000460909 OAS1P00973 400 aaKnown RBP21.74■■□□□ 1.07
RPUSD3-210ENST00000460909 PNMA6AP0CW24 399 aaPredicted RBP21.74■■□□□ 1.07
RPUSD3-210ENST00000460909 SETSIPP0DME0 302 aa21.74■■□□□ 1.07
RPUSD3-210ENST00000460909 PFKLP17858 780 aa21.74■■□□□ 1.07
RPUSD3-210ENST00000460909 PSMC3P17980 439 aa21.74■■□□□ 1.07
RPUSD3-210ENST00000460909 CLCN1P35523 988 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms