RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 REEP2Q9BRK0 252 aa12.47□□□□□ -0.41
PCYT1A-213ENST00000460827 RAXQ9Y2V3 346 aa12.47□□□□□ -0.41
PCYT1A-213ENST00000460827 COL12A1Q99715 3063 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 TCRBV21S2A2A0A5A6 115 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 MYMKA6NI61 221 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 K7ENM7 598 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 LAD1O00515 517 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 AP5Z1O43299 807 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 SCP2P22307 547 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 ZNF131P52739 623 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 ATP2C1P98194 919 aaPredicted RBP12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 RPL6Q02878 288 aaKnown RBP12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 ZNF33AQ06730 810 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 SLC14A1Q13336 389 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 TMEM119Q4V9L6 283 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 SCARA3Q6AZY7 606 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 RHBDF2Q6PJF5 856 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 OSTM1Q86WC4 334 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 PHTF2Q8N3S3 785 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 KIAA1958Q8N8K9 716 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 FSIP1Q8NA03 581 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 RNF38Q9H0F5 515 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 DDX43Q9NXZ2 648 aaKnown RBP12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 ODF2LQ9ULJ1 636 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 STYXL1Q9Y6J8 313 aa12.46□□□□□ -0.41
PCYT1A-213ENST00000460827 SCAMP3O14828 347 aaKnown RBP12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 SNPHO15079 494 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 HCRTO43612 131 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 APODP05090 189 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 PFKLP17858 780 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 GABRG2P18507 467 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 GRIA2P42262 883 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 MAGEA11P43364 429 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 TNFRSF4P43489 277 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 WNT7BP56706 349 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 USP46P62068 366 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 SLC7A9P82251 487 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 GTF2BQ00403 316 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 POU5F1Q01860 360 aaKnown RBP12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 GNL2Q13823 731 aaKnown RBP12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 ADALQ6DHV7 355 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 SLC36A4Q6YBV0 504 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 RABEPKQ7Z6M1 372 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 SLC41A1Q8IVJ1 513 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 SCN4BQ8IWT1 228 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 PGBD3Q8N328 593 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 MYCT1Q8N699 235 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 CXorf38Q8TB03 319 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 FUBP3Q96I24 572 aaKnown RBP eCLIP12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 LRIG1Q96JA1 1093 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 ZNF560Q96MR9 790 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 IKZF4Q9H2S9 585 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 ARHGEF4Q9NR80 690 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 CACNA2D2Q9NY47 1150 aa12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 AGO2Q9UKV8 859 aaKnown RBP12.45□□□□□ -0.42
PCYT1A-213ENST00000460827 IGHV1OR15-9A0A0B4J2B8 117 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 GABRDO14764 452 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 TRAK2O60296 914 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 HUS1O60921 280 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 CBFA2T3O75081 653 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 OLFM2O95897 454 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 SYPP08247 313 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 PNPLA4P41247 253 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 PDE6CP51160 858 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 NEK4P51957 841 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 KDSRQ06136 332 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 RESTQ13127 1097 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 FAM171BQ6P995 826 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 SLCO6A1Q86UG4 719 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 GPBP1Q86WP2 473 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 SPATA2LQ8IUW3 424 aaPredicted RBP12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 NAXDQ8IW45 347 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 CCDC83Q8IWF9 413 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 TMEM86AQ8N2M4 240 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 C1orf127Q8N9H9 656 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 ADAM32Q8TC27 787 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 SPATA17Q96L03 361 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 PARVGQ9HBI0 331 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 CD248Q9HCU0 757 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 CALCOCO1Q9P1Z2 691 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 DKK4Q9UBT3 224 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 HCN2Q9UL51 889 aa12.44□□□□□ -0.42
PCYT1A-213ENST00000460827 A0A1W2PQD8 194 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 A0A1W2PQF6 199 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 ZNF840PA6NDX5 716 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 SLC9A3R1O14745 358 aaPredicted RBP12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 ATP2C2O75185 946 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 ADH1CP00326 375 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 ITGB3P05106 788 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 ADH5P11766 374 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 ADSSP30520 456 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 MYL7Q01449 175 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 SLFN12LQ6IEE8 588 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 TOGARAM2Q6ZUX3 1019 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 GLRX5Q86SX6 157 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 NT5DC4Q86YG4 428 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 MIB1Q86YT6 1006 aa12.43□□□□□ -0.42
PCYT1A-213ENST00000460827 ETFBKMTQ8IXQ9 262 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms