RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 CCL26Q9Y258 94 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 MYO15AQ9UKN7 3530 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 GOLGA6L3A6NEY3 463 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 SOBPA7XYQ1 873 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 A8MXQ7 604 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 PROB1E7EW31 1015 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 PES1O00541 588 aaKnown RBP13.62□□□□□ -0.23
SHISA5-211ENST00000460758 DPYSL4O14531 572 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 CLSTN1O94985 981 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 PTPN1P18031 435 aaKnown RBP13.62□□□□□ -0.23
SHISA5-211ENST00000460758 DDX6P26196 483 aaKnown RBP eCLIP13.62□□□□□ -0.238e-8■□□□□ 9.6
SHISA5-211ENST00000460758 SOX9P48436 509 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 USP46P62068 366 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 SPOPLQ6IQ16 392 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 MAML2Q8IZL2 1156 aaPredicted RBP13.62□□□□□ -0.23
SHISA5-211ENST00000460758 CELF5Q8N6W0 485 aaKnown RBP13.62□□□□□ -0.23
SHISA5-211ENST00000460758 B3GALNT2Q8NCR0 500 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 FBXL13Q8NEE6 735 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 BPIFB1Q8TDL5 484 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 MRPS31Q92665 395 aaKnown RBP13.62□□□□□ -0.23
SHISA5-211ENST00000460758 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 USP13Q92995 863 aaPredicted RBP13.62□□□□□ -0.23
SHISA5-211ENST00000460758 CLDN23Q96B33 292 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 SPATA17Q96L03 361 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 SLC22A12Q96S37 553 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 NELL2Q99435 816 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 B3GNT5Q9BYG0 378 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 BCO2Q9BYV7 579 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 ZNF518BQ9C0D4 1074 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 UXTQ9UBK9 157 aaPredicted RBP13.62□□□□□ -0.23
SHISA5-211ENST00000460758 NDRG2Q9UN36 371 aaKnown RBP13.62□□□□□ -0.23
SHISA5-211ENST00000460758 COQ4Q9Y3A0 265 aa13.62□□□□□ -0.23
SHISA5-211ENST00000460758 FAM186AA6NE01 2351 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 LRRC10BA6NIK2 292 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 F8VP50 259 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 CLDN5O00501 218 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 MAN2B1O00754 1011 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 ASS1P00966 412 aaKnown RBP13.61□□□□□ -0.23
SHISA5-211ENST00000460758 AVPR1AP37288 418 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 GRIK1P39086 918 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 ASPAP45381 313 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 FANCCQ00597 558 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 TNK2Q07912 1038 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 CETN1Q12798 172 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 ARHGAP29Q52LW3 1261 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 WDR44Q5JSH3 913 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 MON1AQ86VX9 555 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 C1orf210Q8IVY1 113 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 CSGALNACT1Q8TDX6 532 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 FAM3CQ92520 227 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 ELOVL4Q9GZR5 314 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 RAB20Q9NX57 234 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 GTSE1Q9NYZ3 720 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 HMGXB4Q9UGU5 601 aa13.61□□□□□ -0.23
SHISA5-211ENST00000460758 MRPS17Q9Y2R5 130 aaKnown RBP13.61□□□□□ -0.23
SHISA5-211ENST00000460758 GTPBP10A4D1E9 387 aaKnown RBP13.6□□□□□ -0.23
SHISA5-211ENST00000460758 C2orf78A6NCI8 922 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 TRIM66O15016 1216 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 SERPINC1P01008 464 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 ANXA13P27216 316 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 CTHP32929 405 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 MAGEA9P43362 315 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 RPS9P46781 194 aaKnown RBP13.6□□□□□ -0.23
SHISA5-211ENST00000460758 MLLT6P55198 1093 aaPredicted RBP13.6□□□□□ -0.23
SHISA5-211ENST00000460758 NOP14P78316 857 aaKnown RBP13.6□□□□□ -0.23
SHISA5-211ENST00000460758 ORC1Q13415 861 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 SGSM1Q2NKQ1 1148 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 TXNDC11Q6PKC3 985 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 DENND5BQ6ZUT9 1274 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 PAQR9Q6ZVX9 377 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 ASCL5Q7RTU5 278 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 FAM35AQ86V20 835 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 TTC8Q8TAM2 541 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 LMO3Q8TAP4 145 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 TAF4BQ92750 862 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 C8orf48Q96LL4 319 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 CEP295NLQ96MC4 621 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 CRACR2AQ9BSW2 395 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 TTLL2Q9BWV7 592 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 IMPG2Q9BZV3 1241 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 INTS2Q9H0H0 1204 aaKnown RBP13.6□□□□□ -0.23
SHISA5-211ENST00000460758 KIF9Q9HAQ2 790 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 APOBEC3GQ9HC16 384 aaKnown RBP13.6□□□□□ -0.23
SHISA5-211ENST00000460758 TRPC7Q9HCX4 862 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.6□□□□□ -0.235e-20■■■■■ 43.7
SHISA5-211ENST00000460758 TDP1Q9NUW8 608 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 SPATA6Q9NWH7 488 aaPredicted RBP13.6□□□□□ -0.23
SHISA5-211ENST00000460758 GCNT4Q9P109 453 aa13.6□□□□□ -0.23
SHISA5-211ENST00000460758 ATG2BQ96BY7 2078 aa13.59□□□□□ -0.23
SHISA5-211ENST00000460758 A0A1B0GTH6 734 aa13.59□□□□□ -0.23
SHISA5-211ENST00000460758 PRR23AA6NEV1 266 aa13.59□□□□□ -0.23
SHISA5-211ENST00000460758 SPECC1L-ADORA2AF8WAN1 911 aa13.59□□□□□ -0.23
SHISA5-211ENST00000460758 GFRA3O60609 400 aa13.59□□□□□ -0.23
SHISA5-211ENST00000460758 SP9P0CG40 484 aa13.59□□□□□ -0.23
SHISA5-211ENST00000460758 KPNA1P52294 538 aaPredicted RBP13.59□□□□□ -0.23
SHISA5-211ENST00000460758 USP4Q13107 963 aa13.59□□□□□ -0.23
SHISA5-211ENST00000460758 ZNF268Q14587 947 aaPredicted RBP13.59□□□□□ -0.23
SHISA5-211ENST00000460758 ZNF77Q15935 545 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms