RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 APOPT1Q96IL0 206 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 FSD1LQ9BXM9 530 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ZMYM2Q9UBW7 1377 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 SIGLEC16A6NMB1 481 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 KBTBD13C9JR72 458 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 BBS5Q8N3I7 341 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 INPP5DQ92835 1189 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 NAF1Q96HR8 494 aaKnown RBP12.53□□□□□ -0.4
CPNE6-202ENST00000460657 TMEM237Q96Q45 408 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 EPAS1Q99814 870 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 FHDC1Q9C0D6 1143 aaPredicted RBP12.53□□□□□ -0.4
CPNE6-202ENST00000460657 PIN4Q9Y237 131 aaKnown RBP12.53□□□□□ -0.4
CPNE6-202ENST00000460657 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.53□□□□□ -0.4
CPNE6-202ENST00000460657 ATRNL1Q5VV63 1379 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 hCG_1818297A0A087WSY0 165 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 ALADP13716 330 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 GRM1Q13255 1194 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 PDK4Q16654 411 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 LLGL2Q6P1M3 1020 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 TMEM154Q6P9G4 183 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 ACOT1Q86TX2 421 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 KAT2BQ92831 832 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 CMTM5Q96DZ9 223 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 COQ4Q9Y3A0 265 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 AP3B1O00203 1094 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 EEF2KO00418 725 aaKnown RBP12.53□□□□□ -0.4
CPNE6-202ENST00000460657 GLRA3O75311 464 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 GNAT1P11488 350 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 RFC1P35251 1148 aaPredicted RBP12.53□□□□□ -0.4
CPNE6-202ENST00000460657 TGFB2P61812 414 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 DEUP1Q05D60 604 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 PTP4A2Q12974 167 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 RASA2Q15283 850 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 PLEKHA7Q6IQ23 1121 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 TRABD2AQ86V40 505 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 CCNJLQ8IV13 435 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 SCG3Q8WXD2 468 aaKnown RBP12.53□□□□□ -0.4
CPNE6-202ENST00000460657 BSNDQ8WZ55 320 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 SAR1AQ9NR31 198 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 GTSE1Q9NYZ3 720 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
CPNE6-202ENST00000460657 TRPA1O75762 1119 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 TGM2P21980 687 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 CDH8P55286 799 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 SLC45A4Q5BKX6 768 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 POLNQ7Z5Q5 900 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 AGAP11Q8TF27 550 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 TBCBQ99426 244 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.52□□□□□ -0.4
CPNE6-202ENST00000460657 BARX2Q9UMQ3 279 aaPredicted RBP12.52□□□□□ -0.4
CPNE6-202ENST00000460657 C5orf60A6NFR6 353 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 DNM1LO00429 736 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 KIF3CO14782 793 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 ACADSP16219 412 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 DPYSL3Q14195 570 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 DCAF6Q58WW2 860 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 SIAH1Q8IUQ4 282 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 ARHGAP18Q8N392 663 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 DCLK2Q8N568 766 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 ICA1LQ8NDH6 482 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 SPATC1LQ9H0A9 340 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 PLEKHA5Q9HAU0 1116 aa12.52□□□□□ -0.4
CPNE6-202ENST00000460657 SAE1Q9UBE0 346 aaPredicted RBP12.52□□□□□ -0.4
CPNE6-202ENST00000460657 KLRG2A4D1S0 409 aaPredicted RBP12.52□□□□□ -0.41
CPNE6-202ENST00000460657 TMEM191CA6NGB0 347 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 SPATA31C2B4DYI2 1134 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 CLGNO14967 610 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 ALOX15BO15296 676 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 MICAL2O94851 1124 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 NPTXRO95502 500 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 CBX6O95503 412 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 MYL3P08590 195 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 MCF2P10911 925 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 PTPRAP18433 802 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 UBA1P22314 1058 aaKnown RBP12.52□□□□□ -0.41
CPNE6-202ENST00000460657 GNL1P36915 607 aaPredicted RBP12.52□□□□□ -0.41
CPNE6-202ENST00000460657 DCAF4L1Q3SXM0 396 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 DENND1BQ6P3S1 775 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.52□□□□□ -0.41
CPNE6-202ENST00000460657 PRCCQ92733 491 aaPredicted RBP12.52□□□□□ -0.41
CPNE6-202ENST00000460657 KCNK16Q96T55 309 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 NAT9Q9BTE0 207 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 UPF3AQ9H1J1 476 aaKnown RBP12.52□□□□□ -0.41
CPNE6-202ENST00000460657 ASB7Q9H672 318 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 MRPL40Q9NQ50 206 aaKnown RBP12.52□□□□□ -0.41
CPNE6-202ENST00000460657 CDY2AQ9Y6F7 541 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 ASS1P00966 412 aaKnown RBP12.52□□□□□ -0.41
CPNE6-202ENST00000460657 PGK2P07205 417 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 KCNA3P22001 575 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 MMP8P22894 467 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 CNTFP26441 200 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 NCALDP61601 193 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 LY6KQ17RY6 165 aa12.52□□□□□ -0.41
CPNE6-202ENST00000460657 BBS12Q6ZW61 710 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms