RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 CBWD5Q5RIA9 395 aa16.54■□□□□ 0.24
CMTM3-203ENST00000460097 FAM13CQ8NE31 585 aa16.54■□□□□ 0.24
CMTM3-203ENST00000460097 MGARPQ8TDB4 240 aa16.54■□□□□ 0.24
CMTM3-203ENST00000460097 TRAPPC9Q96Q05 1148 aa16.54■□□□□ 0.24
CMTM3-203ENST00000460097 TSC22D3Q99576 134 aa16.54■□□□□ 0.24
CMTM3-203ENST00000460097 NTPCRQ9BSD7 190 aaKnown RBP16.54■□□□□ 0.24
CMTM3-203ENST00000460097 MYLK2Q9H1R3 596 aa16.54■□□□□ 0.24
CMTM3-203ENST00000460097 VCXQ9H320 206 aa16.54■□□□□ 0.24
CMTM3-203ENST00000460097 PARVGQ9HBI0 331 aa16.54■□□□□ 0.24
CMTM3-203ENST00000460097 EME2A4GXA9 379 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-203ENST00000460097 FOXN3O00409 490 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-203ENST00000460097 WDR5P61964 334 aaKnown RBP16.53■□□□□ 0.24
CMTM3-203ENST00000460097 KRT17Q04695 432 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 MBTD1Q05BQ5 628 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 BFSP1Q12934 665 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 PDCD2Q16342 344 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-203ENST00000460097 SLC45A4Q5BKX6 768 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 AADACL2Q6P093 401 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 RTN4RL1Q86UN2 441 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-203ENST00000460097 VSIG1Q86XK7 387 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 PALB2Q86YC2 1186 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 MYCT1Q8N699 235 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 ANKRD42Q8N9B4 389 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 UHMK1Q8TAS1 419 aaKnown RBP16.53■□□□□ 0.24
CMTM3-203ENST00000460097 DENND1AQ8TEH3 1009 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 MAML1Q92585 1016 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 CCDC28BQ9BUN5 200 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 SSU72Q9NP77 194 aaKnown RBP16.53■□□□□ 0.24
CMTM3-203ENST00000460097 KMT5AQ9NQR1 393 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 CHST12Q9NRB3 414 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 AGPAT3Q9NRZ7 376 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 NINJ2Q9NZG7 142 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 STOML1Q9UBI4 398 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 NKX1-2Q9UD57 310 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-203ENST00000460097 GGT7Q9UJ14 662 aa16.53■□□□□ 0.24
CMTM3-203ENST00000460097 DENND3A2RUS2 1198 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 DPPA5A6NC42 116 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 CLIC2O15247 247 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 THAP12O43422 761 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 ACSL3O95573 720 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 CREB1P16220 341 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 FOXN2P32314 431 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 RAB27AP51159 221 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 EFNA5P52803 228 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 RAD23BP54727 409 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 OCRLQ01968 901 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 PTP4A2Q12974 167 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 BIRC2Q13490 618 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 PHLDB3Q6NSJ2 640 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.244e-6■■■□□ 19.2
CMTM3-203ENST00000460097 C12orf56Q8IXR9 622 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 SPIRE2Q8WWL2 714 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 DNAJC9Q8WXX5 260 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 FAM136AQ96C01 138 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 SLC7A6OSQ96CW6 309 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-203ENST00000460097 ADAM2Q99965 735 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 KIFC3Q9BVG8 833 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 YIPF3Q9GZM5 350 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 TSPYL2Q9H2G4 693 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-203ENST00000460097 PAPOLBQ9NRJ5 636 aaKnown RBP16.52■□□□□ 0.24
CMTM3-203ENST00000460097 TRIM33Q9UPN9 1127 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 NAALADL1Q9UQQ1 740 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 CHKBQ9Y259 395 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 LRCH1Q9Y2L9 728 aa16.52■□□□□ 0.24
CMTM3-203ENST00000460097 LAMA3Q16787 3333 aa16.52■□□□□ 0.23
CMTM3-203ENST00000460097 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 AMHP03971 560 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 BRD2P25440 801 aaKnown RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 PTPN4P29074 926 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 PCK1P35558 622 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 PEX19P40855 299 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 SPARCL1Q14515 664 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 PDK4Q16654 411 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 MAPK6Q16659 721 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 ZNF720Q7Z2F6 126 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 CCDC25Q86WR0 208 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 PHOSPHO2Q8TCD6 241 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 NUDCD1Q96RS6 583 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 FIZ1Q96SL8 496 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 STRA6Q9BX79 667 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 FZD8Q9H461 694 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 PRMT7Q9NVM4 692 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 PIN4Q9Y237 131 aaKnown RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 NEU2Q9Y3R4 380 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 K7ERI5 159 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 SLC16A4O15374 487 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 MGEA5O60502 916 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 EDF1O60869 148 aaKnown RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 DSC3Q14574 896 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 MESDQ14696 234 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 ZRSR2Q15696 482 aaKnown RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 SGO2Q562F6 1265 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 ZC3H12AQ5D1E8 599 aaKnown RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 ATL2Q8NHH9 583 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 ZNF564Q8TBZ8 553 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 ERP27Q96DN0 273 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 IFT43Q96FT9 208 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 FAM81BQ96LP2 452 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms