RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 FRMD3A2A2Y4 597 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 CLIC2O15247 247 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 NFATC1O95644 943 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 TNNC2P02585 160 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 CHRM1P11229 460 aaPredicted RBP16.09■□□□□ 0.17
LMNA-209ENST00000459904 MAGEA11P43364 429 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 SHC2P98077 582 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 TAF10Q12962 218 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 NR1H3Q13133 447 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 DHCR24Q15392 516 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 CYP2U1Q7Z449 544 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 LIMS2Q7Z4I7 341 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 NAT16Q8N8M0 369 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 DEFB124Q8NES8 71 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 FUBP3Q96I24 572 aaKnown RBP eCLIP16.09■□□□□ 0.17
LMNA-209ENST00000459904 ZNF518BQ9C0D4 1074 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 OLFML3Q9NRN5 406 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 TMEM74BQ9NUR3 256 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 HSPBP1Q9NZL4 362 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 MBD1Q9UIS9 605 aaPredicted RBP16.09■□□□□ 0.17
LMNA-209ENST00000459904 MMP17Q9ULZ9 603 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 DMXL2Q8TDJ6 3036 aa16.09■□□□□ 0.17
LMNA-209ENST00000459904 ZNF840PA6NDX5 716 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 SOBPA7XYQ1 873 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 TRIM24O15164 1050 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 DLATP10515 647 aaKnown RBP16.08■□□□□ 0.16
LMNA-209ENST00000459904 WARSP23381 471 aaKnown RBP16.08■□□□□ 0.16
LMNA-209ENST00000459904 WASP42768 502 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 MAPK8P45983 427 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 CYP2J2P51589 502 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 CRY1Q16526 586 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 USP39Q53GS9 565 aaKnown RBP16.08■□□□□ 0.16
LMNA-209ENST00000459904 RHBDF2Q6PJF5 856 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 C4orf50Q6ZRC1 276 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 DENND5BQ6ZUT9 1274 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 RASSF3Q86WH2 238 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 NELFCDQ8IXH7 590 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 ADGRG2Q8IZP9 1017 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 IL17RCQ8NAC3 791 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 OR6B3Q8NGW1 331 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 SPATA17Q96L03 361 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 FNBP1Q96RU3 617 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 B3GNT5Q9BYG0 378 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 FAM208BQ5VWN6 2430 aa16.08■□□□□ 0.16
LMNA-209ENST00000459904 ZNF233A6NK53 670 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 KHNYNO15037 678 aaKnown RBP16.07■□□□□ 0.16
LMNA-209ENST00000459904 ADAM23O75077 832 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 MBL2P11226 248 aaPredicted RBP16.07■□□□□ 0.16
LMNA-209ENST00000459904 HOXB3P14651 431 aaPredicted RBP16.07■□□□□ 0.16
LMNA-209ENST00000459904 ANXA13P27216 316 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 GNL1P36915 607 aaPredicted RBP16.07■□□□□ 0.16
LMNA-209ENST00000459904 PTGER3P43115 390 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 PGFP49763 221 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 CDH8P55286 799 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 MYO1EQ12965 1108 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 DUOXA2Q1HG44 320 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 TRAPPC11Q7Z392 1133 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 MYCBPAPQ8TBZ2 947 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 HMGB4Q8WW32 186 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 ZNF516Q92618 1163 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 CCDC127Q96BQ5 260 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 SNX25Q9H3E2 840 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 TMEM9BQ9NQ34 198 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 CHORDC1Q9UHD1 332 aaPredicted RBP16.07■□□□□ 0.16
LMNA-209ENST00000459904 ZMIZ1Q9ULJ6 1067 aa16.07■□□□□ 0.16
LMNA-209ENST00000459904 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
LMNA-209ENST00000459904 NBEAQ8NFP9 2946 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 DSPP15924 2871 aaKnown RBP16.06■□□□□ 0.16
LMNA-209ENST00000459904 PROS1P07225 676 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 IRF1P10914 325 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 PTPN1P18031 435 aaKnown RBP16.06■□□□□ 0.16
LMNA-209ENST00000459904 SYT1P21579 422 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 TXLNAP40222 546 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 CASP4P49662 377 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 ORC1Q13415 861 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 CUL4AQ13619 759 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 LY6G5CQ5SRR4 150 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
LMNA-209ENST00000459904 VSTM1Q6UX27 236 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 UNQ6494/PRO21346Q6UXR6 183 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 SCARA5Q6ZMJ2 495 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 CCDC73Q6ZRK6 1079 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 OR2I1PQ8NGU4 316 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 SCAMP5Q8TAC9 235 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
LMNA-209ENST00000459904 CNOT6LQ96LI5 555 aaKnown RBP16.06■□□□□ 0.16
LMNA-209ENST00000459904 KCNK16Q96T55 309 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 TTLL2Q9BWV7 592 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 TRIM9Q9C026 710 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 GZF1Q9H116 711 aaPredicted RBP16.06■□□□□ 0.16
LMNA-209ENST00000459904 UPF2Q9HAU5 1272 aaKnown RBP16.06■□□□□ 0.16
LMNA-209ENST00000459904 NXF1Q9UBU9 619 aaKnown RBP16.06■□□□□ 0.16
LMNA-209ENST00000459904 WASF3Q9UPY6 502 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 PCDH15Q96QU1 1955 aa16.06■□□□□ 0.16
LMNA-209ENST00000459904 TCRBV21S2A2A0A5A6 115 aa16.05■□□□□ 0.16
LMNA-209ENST00000459904 TGFB1I1O43294 461 aa16.05■□□□□ 0.16
LMNA-209ENST00000459904 KAT7O95251 611 aa16.05■□□□□ 0.16
LMNA-209ENST00000459904 OAS1P00973 400 aaKnown RBP16.05■□□□□ 0.16
LMNA-209ENST00000459904 TCF3P15923 654 aa16.05■□□□□ 0.16
LMNA-209ENST00000459904 TNNI1P19237 187 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms