RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	DRAP1	Q14919	205 aa	Predicted RBP	10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	TAF12	Q16514	161 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	DENND1B	Q6P3S1	775 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	LRSAM1	Q6UWE0	723 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	ENOSF1	Q7L5Y1	443 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	BHLHA9	Q7RTU4	235 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	PIGZ	Q86VD9	579 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	FAM71A	Q8IYT1	594 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	NUP93	Q8N1F7	819 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	SLC44A3	Q8N4M1	653 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	MAB21L3	Q8N8X9	362 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	SMARCD2	Q92925	531 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	CEP295NL	Q96MC4	621 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	TASP1	Q9H6P5	420 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	NMUR1	Q9HB89	426 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	C11orf16	Q9NQ32	467 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	PLCB1	Q9NQ66	1216 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	OSER1	Q9NX31	292 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	GMIP	Q9P107	970 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	CYTH4	Q9UIA0	394 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	CCL26	Q9Y258	94 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	PATJ	Q8NI35	1801 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	COL4A3	Q01955	1670 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	NCOR1	O75376	2440 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	OBSL1	O75147	1896 aa		10.85	□□□□□ -0.67
MRPL55-223	ENST00000459783	PI4K2B	G5E9Z4	385 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	YWHAQ	P27348	245 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	KIF11	P52732	1056 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	JAM2	P57087	298 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	ZNF445	P59923	1031 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	POLR2F	P61218	127 aa	Known RBP	10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	ZXDB	P98169	803 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	UBXN1	Q04323	297 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	CNGA2	Q16280	664 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	RAB41	Q5JT25	222 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	VIT	Q6UXI7	678 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	SCD5	Q86SK9	330 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	SLC47A2	Q86VL8	602 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	MON1A	Q86VX9	555 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	SLC35F5	Q8WV83	523 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	ZNF606	Q8WXB4	792 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	NDRG1	Q92597	394 aa	Known RBP	10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	USP13	Q92995	863 aa	Predicted RBP	10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	SECISBP2L	Q93073	1101 aa	Known RBP	10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	CYP2S1	Q96SQ9	504 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	TSPY26P	Q9H489	355 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	TRPV4	Q9HBA0	871 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	PNPLA8	Q9NP80	782 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	IGSF9	Q9P2J2	1179 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	UXT	Q9UBK9	157 aa	Predicted RBP	10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	KIAA1257	Q9ULG3	409 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783	USP3	Q9Y6I4	520 aa		10.84	□□□□□ -0.67
MRPL55-223	ENST00000459783		F8VZ95	297 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783		M0QYV0	167 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	XPO1	O14980	1071 aa	Known RBP	10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	DCX	O43602	365 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	ECI2	O75521	394 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	RTN3	O95197	1032 aa	Predicted RBP	10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	FGF19	O95750	216 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	OLFM2	O95897	454 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	OAS1	P00973	400 aa	Known RBP	10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	PBX1	P40424	430 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	USP8	P40818	1118 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	GPD2	P43304	727 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	PLA2G4A	P47712	749 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	RGS7	P49802	495 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	BCAT1	P54687	386 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZXDA	P98168	799 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	FANCC	Q00597	558 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	BST2	Q10589	180 aa	Known RBP	10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	TDG	Q13569	410 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	RAPGEF1	Q13905	1077 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	GRM2	Q14416	872 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	NR1I3	Q14994	352 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	FKBP15	Q5T1M5	1219 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	PMF1	Q6P1K2	205 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	CMTM8	Q8IZV2	173 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	WDTC1	Q8N5D0	677 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	ARL14EP	Q8N8R7	260 aa	Predicted RBP	10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	OLIG1	Q8TAK6	271 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	DDX1	Q92499	740 aa	Known RBP	10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	FBXO32	Q969P5	355 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	FAM122A	Q96E09	287 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	RNF38	Q9H0F5	515 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	SLITRK6	Q9H5Y7	841 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	CCSER2	Q9H7U1	834 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	NLRC4	Q9NPP4	1024 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	TJP2	Q9UDY2	1190 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	SORCS3	Q9UPU3	1222 aa		10.83	□□□□□ -0.68
MRPL55-223	ENST00000459783	SHISA7	A6NL88	538 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	HEPACAM2	A8MVW5	462 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	PIK3R2	O00459	728 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	AP5Z1	O43299	807 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	THAP12	O43422	761 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	SETSIP	P0DME0	302 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	WEE1	P30291	646 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms