RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SPATA18Q8TC71 538 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 EMID1Q96A84 441 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 APOPT1Q96IL0 206 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 HPDLQ96IR7 371 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 PAIP2Q9BPZ3 127 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 SIKE1Q9BRV8 207 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 TRIM55Q9BYV6 548 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 EBF2Q9HAK2 575 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 CD248Q9HCU0 757 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 VTA1Q9NP79 307 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 HESX1Q9UBX0 185 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 MCM8Q9UJA3 840 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 POLIQ9UNA4 740 aa9.24□□□□□ -0.93
HDAC3-202ENST00000459727 MTO1Q9Y2Z2 717 aaKnown RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-202ENST00000459727 DOCK5Q9H7D0 1870 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 PAPPA2Q9BXP8 1791 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 SPDYE5A6NIY4 337 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 UNCXA6NJT0 531 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 XPOTO43592 962 aaKnown RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 KRT38O76015 456 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 C22orf31O95567 290 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ZBED1O96006 694 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 GH1P01241 217 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ITGB3P05106 788 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ZSCAN5DPP0CG00 497 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 STAG3L1P0CL83 205 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 CXCL8P10145 99 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 SDC4P31431 198 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 FOXN2P32314 431 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 SERPINB9P50453 376 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 CDH6P55285 790 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 BASP1P80723 227 aaKnown RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 DNAJC3Q13217 504 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 MKRN4PQ13434 485 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 DPYSL3Q14195 570 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ZRSR2Q15696 482 aaKnown RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 TBCCQ15814 346 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 LY6KQ17RY6 165 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ATP13A4Q4VNC1 1196 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 WASHC2DQ5SRD0 308 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 TREML2Q5T2D2 321 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 TTC39BQ5VTQ0 682 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 DAB2IPQ5VWQ8 1189 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 FAM91A1Q658Y4 838 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ATG16L1Q676U5 607 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 LVRNQ6Q4G3 990 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 SLC26A11Q86WA9 606 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 UNC93AQ86WB7 457 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 CCNJLQ8IV13 435 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 PSTKQ8IV42 348 aaKnown RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 FITM2Q8N6M3 262 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 LRRC52Q8N7C0 313 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 FBXO36Q8NEA4 188 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 TRPM4Q8TD43 1214 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 SLC44A1Q8WWI5 657 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ELMO3Q96BJ8 720 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 HEXIM2Q96MH2 286 aaKnown RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 CPXM1Q96SM3 734 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 CALN1Q9BXU9 219 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 PDGFDQ9GZP0 370 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ASCC2Q9H1I8 757 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 FAM96AQ9H5X1 160 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ETNK1Q9HBU6 452 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 XAB2Q9HCS7 855 aaKnown RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 RCOR3Q9P2K3 495 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-202ENST00000459727 LNPEPQ9UIQ6 1025 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 SIX4Q9UIU6 781 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 KCNH4Q9UQ05 1017 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 TELO2Q9Y4R8 837 aa9.23□□□□□ -0.93
HDAC3-202ENST00000459727 ZSWIM8A7E2V4 1837 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 C2CD4BA6NLJ0 364 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 LACTBL1A8MY62 500 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 HACD1B0YJ81 288 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 H7C0C1 242 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 I3L4J1 428 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 LPXNO60711 386 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 DNAJC6O75061 913 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 STK10O94804 968 aaKnown RBP9.22□□□□□ -0.93
HDAC3-202ENST00000459727 NFICP08651 508 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 TXNP10599 105 aaKnown RBP9.22□□□□□ -0.93
HDAC3-202ENST00000459727 CREB1P16220 341 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 PDGFRAP16234 1089 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 MARK3P27448 753 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 IL1R2P27930 398 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 RPA3P35244 121 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-202ENST00000459727 GRM5P41594 1212 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 GPD2P43304 727 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 ACADSBP45954 432 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 ATP5OP48047 213 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 CCNG1P51959 295 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 DYNLT1P63172 113 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 SLC18A2Q05940 514 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 KCNJ11Q14654 390 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 HSDL1Q3SXM5 330 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 BBS9Q3SYG4 887 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 SEZ6Q53EL9 994 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 ARHGAP17Q68EM7 881 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 JADE1Q6IE81 842 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms