RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 SCXQ7RTU7 201 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 VSIG10LQ86VR7 867 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 STK11IPQ8N1F8 1099 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 LINC00337Q8N6G1 96 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ARL6IP6Q8N6S5 226 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ACRBPQ8NEB7 543 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ZNF548Q8NEK5 533 aaPredicted RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 C1orf64Q8NEQ6 169 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ZNRF2Q8NHG8 242 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 IL17DQ8TAD2 202 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 CD99L2Q8TCZ2 262 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 MCOLN3Q8TDD5 553 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 C2CD4CQ8TF44 421 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 RUBCNQ92622 972 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ABTB1Q969K4 478 aaPredicted RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 LGALS12Q96DT0 336 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 TRIM44Q96DX7 344 aaPredicted RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 SLC39A13Q96H72 371 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 CCDC120Q96HB5 630 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 FAM46AQ96IP4 442 aaKnown RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 GJD4Q96KN9 370 aaPredicted RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 POM121L2Q96KW2 1035 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 CITED4Q96RK1 184 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 PPP1R9BQ96SB3 815 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ZNF251Q9BRH9 671 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 KIFC3Q9BVG8 833 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 OSBPL11Q9BXB4 747 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 BHLHE41Q9C0J9 482 aaPredicted RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 EGLN1Q9GZT9 426 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 RNF38Q9H0F5 515 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 QRSL1Q9H0R6 528 aaKnown RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 WNT5BQ9H1J7 359 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 PPDPFQ9H3Y8 114 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 HIPK3Q9H422 1215 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 TOR3AQ9H497 397 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 RNPEPQ9H4A4 650 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 SMYD3Q9H7B4 428 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 KAT14Q9H8E8 782 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 SENP2Q9HC62 589 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 TXNRD2Q9NNW7 524 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ADAP2Q9NPF8 381 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 TREX1Q9NSU2 369 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ZBTB40Q9NUA8 1239 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ADA2Q9NZK5 511 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 CXXC1Q9P0U4 656 aaPredicted RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 CD300AQ9UGN4 299 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 CDC42EP3Q9UKI2 254 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 DENND2AQ9ULE3 1009 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 TTF2Q9UNY4 1162 aaKnown RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 USP22Q9UPT9 525 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 LEMD3Q9Y2U8 911 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 PPP2R3BQ9Y5P8 575 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 SOS1Q07889 1333 aaPredicted RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 PPIP5K1Q6PFW1 1433 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 ERBINQ96RT1 1412 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 YTHDC2Q9H6S0 1430 aaKnown RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 SYNJ2O15056 1496 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 PRDM15P57071 1507 aaPredicted RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 MARF1Q9Y4F3 1742 aaKnown RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 PLXNA4Q9HCM2 1894 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 CFAP65Q6ZU64 1925 aaKnown RBP-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 DOCK8Q8NF50 2099 aa-1.78□□□□□ -2.69
SNORD54-201ENST00000459159 CHD1O14646 1710 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 ZMYM6O95789 1325 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 USP42Q9H9J4 1324 aaKnown RBP-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 TRAV26-2A0A0B4J265 109 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 TTC24A2A3L6 582 aaPredicted RBP-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 FAM83GA6ND36 823 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 DRGXA6NNA5 263 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 F6X3S4 739 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 FSCN2O14926 492 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 EREGO14944 169 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 SGCEO43556 437 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 GREM1O60565 184 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 RAB11FIP3O75154 756 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 FBXO24O75426 580 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 KATNA1O75449 491 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 GPC4O75487 556 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 SRSF10O75494 262 aaKnown RBP-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 PRPF6O94906 941 aaKnown RBP-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 STBD1O95210 358 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 CNOT4O95628 575 aaKnown RBP-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 GPR75O95800 540 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 LGI1O95970 557 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 PLAUP00749 431 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 IGKV1D-33P01593 117 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 IGKV1-33P01594 117 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 DANCRP0C864 163 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 CD46P15529 392 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 KLRC1P26715 233 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 LIMS1P48059 325 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 VAV2P52735 878 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 PRMT2P55345 433 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 ITGA1P56199 1179 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 CCNA1P78396 465 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 MRPS5P82675 430 aaKnown RBP-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 PCDH1Q08174 1060 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 SPAG11BQ08648 103 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 PLCXD2Q0VAA5 305 aa-1.79□□□□□ -2.7
SNORD54-201ENST00000459159 NOGQ13253 232 aa-1.79□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms