RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 GTSE1Q9NYZ3 720 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 HNRNPCL2B2RXH8 293 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 HNRNPCL1O60812 293 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 TRIM16O95361 564 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 HADHAP40939 763 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 ARHGDIAP52565 204 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PTK6Q13882 451 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CRY2Q49AN0 593 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 ADCK2Q7Z695 626 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 SPIRE2Q8WWL2 714 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CAPNS2Q96L46 248 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM161BQ96MY7 647 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 DACH2Q96NX9 599 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PNMA5Q96PV4 448 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 SIKE1Q9BRV8 207 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 POLE3Q9NRF9 147 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 KLHL11Q9NVR0 708 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 STX18Q9P2W9 335 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PPARGC1AQ9UBK2 798 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CHMP2BQ9UQN3 213 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 HSPA9P38646 679 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PMS2P54278 862 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 TMPRSS15P98073 1019 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 LY6KQ17RY6 165 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 RARS2Q5T160 578 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PTRHD1Q6GMV3 140 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 UGT3A1Q6NUS8 523 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 GPR142Q7Z601 462 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PPM1NQ8N819 430 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 DDI1Q8WTU0 396 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.13□□□□□ -0.639e-8■■□□□ 11.8
AMBRA1-202ENST00000458649 MAML1Q92585 1016 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 MKL1Q969V6 931 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 MTBPQ96DY7 904 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 MS4A14Q96JA4 679 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 FRMD8P1Q9BZ68 369 aaPredicted RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PPCSQ9HAB8 311 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 LATS2Q9NRM7 1088 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 MRPL17Q9NRX2 175 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PRDM4Q9UKN5 801 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 NCKAP1Q9Y2A7 1128 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM95CA0A1B0GW59 222 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 ATP9BO43861 1147 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 TLR2O60603 784 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 MRPL28Q13084 256 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 RETSATQ6NUM9 610 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 TRIM65Q6PJ69 517 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CERS5Q8N5B7 392 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 GRAMD1AQ96CP6 724 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 ATP6V1G3Q96LB4 118 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 EPN3Q9H201 632 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 AKAP7Q9P0M2 348 aaPredicted RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 ARHGAP26Q9UNA1 814 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 DLG5Q8TDM6 1919 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 A0A0G2JND7 137 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 SPAG6O75602 509 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 TYK2P29597 1187 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 ZNF284Q2VY69 593 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 OMA1Q96E52 524 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 VIPAS39Q9H9C1 493 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 MRGBPQ9NV56 204 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 CRLS1Q9UJA2 301 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 GTPBP10A4D1E9 387 aaKnown RBP11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 PLEKP08567 350 aaPredicted RBP11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 PON1P27169 355 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 EPHB2P29323 1055 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 GRK4P32298 578 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 GEMP55040 296 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 MAGOHP61326 146 aaKnown RBP11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 PHKG1Q16816 387 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 TMEM86AQ8N2M4 240 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 MSL3Q8N5Y2 521 aaKnown RBP11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 KIAA0895Q8NCT3 520 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 ARHGEF38Q9NXL2 777 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 PIK3R2O00459 728 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 STX7O15400 261 aaKnown RBP11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 LGALS2P05162 132 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 DNAJB2P25686 324 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 ILF2Q12905 390 aaKnown RBP11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 NANOGNBQ7Z5D8 188 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 DDHD1Q8NEL9 900 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 OSCP1Q8WVF1 389 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 GPRC5CQ9NQ84 441 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 SPACA6W5XKT8 324 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 NFASCO94856 1347 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 FGRP09769 529 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 ADCYAP1R1P41586 468 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 CASP4P49662 377 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms