RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 PABPC1P11940 636 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 SERPINB6P35237 376 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 CCR3P51677 355 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 EIF2B5Q13144 721 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 MTMR1Q13613 665 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 RAPGEF1Q13905 1077 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 PGM5Q15124 567 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 TBCCQ15814 346 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 ASIC2Q16515 512 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 MYLK3Q32MK0 819 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 ANO5Q75V66 913 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 OTOP1Q7RTM1 612 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 MTDHQ86UE4 582 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 CATSPER3Q86XQ3 398 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 ICA1LQ8NDH6 482 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 CHST13Q8NET6 341 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 WNK4Q96J92 1243 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 GPATCH1Q9BRR8 931 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 C1orf21Q9H246 121 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 SSU72Q9NP77 194 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 PXMP2Q9NR77 195 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 WHRNQ9P202 907 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 IGSF9Q9P2J2 1179 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 CRNNQ9UBG3 495 aaPredicted RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 GNPTGQ9UJJ9 305 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 B3GNT3Q9Y2A9 372 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 PCDHA3Q9Y5H8 950 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 NOX1Q9Y5S8 564 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 HGSO14964 777 aaPredicted RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 MCF2LO15068 1137 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 ADCY6O43306 1168 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 TTC4O95801 387 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 GH1P01241 217 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 APOEP02649 317 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 CCND2P30279 289 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 GSSP48637 474 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 CALCOCO2Q13137 446 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 APOFQ13790 326 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 NR1D2Q14995 579 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 ARHGEF6Q15052 776 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 ECM1Q16610 540 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 LONRF1Q17RB8 773 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 SPOPLQ6IQ16 392 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 FASTKD5Q7L8L6 764 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 DYMQ7RTS9 669 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 KCNK18Q7Z418 384 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 PALB2Q86YC2 1186 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 SLC7A5P1Q8MH63 180 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 SPERTQ8NA61 448 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 NSUN6Q8TEA1 469 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 SNF8Q96H20 258 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 EIF2AK1Q9BQI3 630 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 PDCD2LQ9BRP1 358 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 C10orf88Q9H8K7 445 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 PARVGQ9HBI0 331 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 KCNH7Q9NS40 1196 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 TBC1D22BQ9NU19 505 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 TYW1Q9NV66 732 aaKnown RBP11.84□□□□□ -0.51
DDX39B-214ENST00000458640 KCNH4Q9UQ05 1017 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 UBIAD1Q9Y5Z9 338 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 CEPT1Q9Y6K0 416 aa11.84□□□□□ -0.51
DDX39B-214ENST00000458640 SYNGAP1Q96PV0 1343 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 CENPBD1B2RD01 187 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 E9PMD0 336 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 CHMP2AO43633 222 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 TBCAO75347 108 aaKnown RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 DGKIO75912 1065 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 MYCLP1P12525 358 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 ITGB5P18084 799 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 FGFR4P22455 802 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 COPB2P35606 906 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 CETN2P41208 172 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 RPL21P46778 160 aaKnown RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 HSPA13P48723 471 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 PCYT1AP49585 367 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 EIF2B2P49770 351 aaKnown RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 WDR4P57081 412 aaKnown RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 BAATQ14032 418 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 TREML2Q5T2D2 321 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 DLK2Q6UY11 383 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 LBX2Q6XYB7 198 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 FRA10AC1Q70Z53 315 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 MIER3Q7Z3K6 550 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 GPBP1Q86WP2 473 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 CATSPER1Q8NEC5 780 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 MED30Q96HR3 178 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 CCDC138Q96M89 665 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 TAAR1Q96RJ0 339 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 PRPF18Q99633 342 aaKnown RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 IMPG2Q9BZV3 1241 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 S100A14Q9HCY8 104 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-214ENST00000458640 AGTPBP1Q9UPW5 1226 aa11.83□□□□□ -0.52
DDX39B-214ENST00000458640 RIPK3Q9Y572 518 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms