RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CLEC20AQ6ZU45 233 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 RRAGAQ7L523 313 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 ANKRD52Q8NB46 1076 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 CSGALNACT1Q8TDX6 532 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 NELL2Q99435 816 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 UBE2TQ9NPD8 197 aaPredicted RBP17.08■□□□□ 0.32
CD28-203ENST00000458610 ARHGEF3Q9NR81 526 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 CA14Q9ULX7 337 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
CD28-203ENST00000458610 GLULP15104 373 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 NUBP1P53384 320 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 MLLT6P55198 1093 aaPredicted RBP17.07■□□□□ 0.32
CD28-203ENST00000458610 GRM2Q14416 872 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 SKOR2Q2VWA4 1001 aaPredicted RBP17.07■□□□□ 0.32
CD28-203ENST00000458610 TCP11X2Q5H9J9 407 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 PHLDB3Q6NSJ2 640 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 CAVIN1Q6NZI2 390 aaKnown RBP17.07■□□□□ 0.32
CD28-203ENST00000458610 C1orf228Q6PIY5 440 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 TRIM65Q6PJ69 517 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 UBR7Q8N806 425 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 ZMIZ2Q8NF64 920 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 PRRX2Q99811 253 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 CRACR2AQ9BSW2 395 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 SAMSN1Q9NSI8 373 aaKnown RBP17.07■□□□□ 0.32
CD28-203ENST00000458610 TMEM30AQ9NV96 361 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 TMEM63CQ9P1W3 806 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 MRPS17Q9Y2R5 130 aaKnown RBP17.07■□□□□ 0.32
CD28-203ENST00000458610 HCN4Q9Y3Q4 1203 aa17.07■□□□□ 0.32
CD28-203ENST00000458610 FAM92AA1XBS5 289 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 MAN2B1O00754 1011 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 TADA3O75528 432 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 BEST1O76090 585 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 ACO1P21399 889 aaKnown RBP17.06■□□□□ 0.32
CD28-203ENST00000458610 PSEN1P49768 467 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 STARD6P59095 220 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 MYL5Q02045 173 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 MLF2Q15773 248 aaPredicted RBP17.06■□□□□ 0.32
CD28-203ENST00000458610 HECTD3Q5T447 861 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 SNX30Q5VWJ9 437 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 ASTLQ6HA08 431 aaPredicted RBP17.06■□□□□ 0.32
CD28-203ENST00000458610 GPIHBP1Q8IV16 184 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 KIAA1958Q8N8K9 716 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 ARL14EPQ8N8R7 260 aaPredicted RBP17.06■□□□□ 0.32
CD28-203ENST00000458610 FLCNQ8NFG4 579 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 SCAMP5Q8TAC9 235 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 USP13Q92995 863 aaPredicted RBP17.06■□□□□ 0.32
CD28-203ENST00000458610 MSANTD3Q96H12 275 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 KCNH6Q9H252 994 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 TLR8Q9NR97 1041 aaKnown RBP17.06■□□□□ 0.32
CD28-203ENST00000458610 APEX2Q9UBZ4 518 aa17.06■□□□□ 0.32
CD28-203ENST00000458610 CHORDC1Q9UHD1 332 aaPredicted RBP17.06■□□□□ 0.32
CD28-203ENST00000458610 VCANP13611 3396 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 PRAMEF12O95522 483 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 KRT5P13647 590 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 TCF3P15923 654 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 SLC9A1P19634 815 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
CD28-203ENST00000458610 PON1P27169 355 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 AVPR2P30518 371 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 TUBP50607 506 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 BCAT1P54687 386 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 TYRO3Q06418 890 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 CNGA2Q16280 664 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 TADA2BQ86TJ2 420 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 DDX42Q86XP3 938 aaKnown RBP eCLIP17.05■□□□□ 0.32
CD28-203ENST00000458610 ARHGEF19Q8IW93 802 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 RBBP8NLQ8NC74 664 aaPredicted RBP17.05■□□□□ 0.32
CD28-203ENST00000458610 CYP2S1Q96SQ9 504 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 NACA2Q9H009 215 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 C8orf33Q9H7E9 229 aaPredicted RBP17.05■□□□□ 0.32
CD28-203ENST00000458610 TSPAN16Q9UKR8 245 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 ARHGAP26Q9UNA1 814 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 CNTN6Q9UQ52 1028 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 SCML2Q9UQR0 700 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 TECTAO75443 2155 aa17.05■□□□□ 0.32
CD28-203ENST00000458610 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 C2orf78A6NCI8 922 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 SMTNL1A8MU46 457 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 NCAM2O15394 837 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 MED7O43513 233 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 SETSIPP0DME0 302 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 KIF11P52732 1056 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 SLC7A9P82251 487 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 AMPD2Q01433 879 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 BST2Q10589 180 aaKnown RBP17.04■□□□□ 0.32
CD28-203ENST00000458610 PDGFRLQ15198 375 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 GOLGA7BQ2TAP0 167 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 FKBP15Q5T1M5 1219 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 CDKAL1Q5VV42 579 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 LCLAT1Q6UWP7 414 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 ZNF852Q6ZMS4 543 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 ARHGAP18Q8N392 663 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 RSPRY1Q96DX4 576 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 SMG9Q9H0W8 520 aaKnown RBP17.04■□□□□ 0.32
CD28-203ENST00000458610 TBC1D17Q9HA65 648 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 LRRC4Q9HBW1 653 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 FANCLQ9NW38 375 aa17.04■□□□□ 0.32
CD28-203ENST00000458610 KANSL1LA0AUZ9 987 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms