RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 STK32AQ8WU08 396 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 RABGGTAQ92696 567 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 C18orf8Q96DM3 657 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 HES6Q96HZ4 224 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 CAPZA3Q96KX2 299 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 SENP8Q96LD8 212 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 TWNKQ96RR1 684 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 TGS1Q96RS0 853 aaKnown RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 RAD9AQ99638 391 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 NCAPGQ9BPX3 1015 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 CARD9Q9H257 536 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 CXCL16Q9H2A7 254 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 ALG13Q9NP73 1137 aaKnown RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 PRKAG3Q9UGI9 489 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 HMGXB4Q9UGU5 601 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 TSPAN16Q9UKR8 245 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 L1RE1Q9UN81 338 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 ZFHX2Q9C0A1 2572 aaPredicted RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 CFAP54Q96N23 3096 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 COL4A6Q14031 1691 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 GOLGA6L10A0A0M3HER8 536 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 CASTOR2A6NHX0 329 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 MEIS3P2A8K0S8 358 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 TMEM110-MUSTN1A8MSY1 372 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 PGRMC1O00264 195 aaKnown RBP9.42□□□□□ -0.9
VPS50-207ENST00000458530 PSTPIP1O43586 416 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 NCK2O43639 380 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 NBNO60934 754 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 EFCAB14O75071 495 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 B3GAT3O94766 335 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 PROSCO94903 275 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 POMCP01189 267 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 CALCAP01258 141 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 TYMPP19971 482 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 CTNNA2P26232 953 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 GABRB2P47870 512 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 CLCNKBP51801 687 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 PSMC1P62191 440 aaKnown RBP9.42□□□□□ -0.9
VPS50-207ENST00000458530 PDCLQ13371 301 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 MAMLD1Q13495 774 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 PIGHQ14442 188 aaPredicted RBP9.42□□□□□ -0.9
VPS50-207ENST00000458530 TEX35Q5T0J7 233 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 SCARA3Q6AZY7 606 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 CNKSR3Q6P9H4 555 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 TMCO2Q7Z6W1 182 aaPredicted RBP9.42□□□□□ -0.9
VPS50-207ENST00000458530 DNAAF5Q86Y56 855 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 NPAS4Q8IUM7 802 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 THEM5Q8N1Q8 247 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 DBF4BQ8NFT6 615 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 FNIP1Q8TF40 1166 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 KBTBD7Q8WVZ9 684 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 MAIP1Q8WWC4 291 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 RUBCNQ92622 972 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 ZSWIM1Q9BR11 485 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 ARGLU1Q9NWB6 273 aaPredicted RBP9.42□□□□□ -0.9
VPS50-207ENST00000458530 DDX43Q9NXZ2 648 aaKnown RBP9.42□□□□□ -0.9
VPS50-207ENST00000458530 CDH9Q9ULB4 789 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 ALG6Q9Y672 507 aa9.42□□□□□ -0.9
VPS50-207ENST00000458530 ABHD14A-ACY1A0A1B0GW23 586 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 SIGLEC16A6NMB1 481 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 CCDC188H7C350 402 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 M0QZQ0 153 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 GABRDO14764 452 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 SPTLC1O15269 473 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 CEP104O60308 925 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 CYP11A1P05108 521 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 COMTP21964 271 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 CTNNA1P35221 906 aaKnown RBP9.41□□□□□ -0.9
VPS50-207ENST00000458530 SCNN1AP37088 669 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 GPD2P43304 727 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 DNA2P51530 1060 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 RWDD2BP57060 319 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 HTRA4P83105 476 aaPredicted RBP9.41□□□□□ -0.9
VPS50-207ENST00000458530 TSPY1Q01534 308 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 DSC1Q08554 894 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 ELAVL2Q12926 359 aaKnown RBP9.41□□□□□ -0.9
VPS50-207ENST00000458530 PTP4A2Q12974 167 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 ORC1Q13415 861 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 IKBKEQ14164 716 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 ACAP1Q15027 740 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 PTPN20Q4JDL3 420 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 ODF2Q5BJF6 829 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 WSCD1Q658N2 575 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 BMP8AQ7Z5Y6 402 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 LRRC43Q8N309 656 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
VPS50-207ENST00000458530 ANKRD52Q8NB46 1076 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 ACTRT1Q8TDG2 376 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 LINC01599Q8WXQ3 324 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 MRPL38Q96DV4 380 aaKnown RBP9.41□□□□□ -0.9
VPS50-207ENST00000458530 SUSD3Q96L08 255 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 HSFY1Q96LI6 401 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 MCEEQ96PE7 176 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 HNRNPABQ99729 332 aaKnown RBP9.41□□□□□ -0.9
VPS50-207ENST00000458530 SYT15Q9BQS2 421 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 ST7Q9NRC1 585 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 FAM49BQ9NUQ9 324 aa9.41□□□□□ -0.9
VPS50-207ENST00000458530 MIOSQ9NXC5 875 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms