RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 NFKBIL1Q9UBC1 381 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-207ENST00000458046 PFDN2Q9UHV9 154 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 LAMP5Q9UJQ1 280 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 MYPNQ86TC9 1320 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 AHCYL1O43865 530 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 SNX3O60493 162 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 DNAJC8O75937 253 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 GJB6O95452 261 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 TNNI1P19237 187 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 WNT7BP56706 349 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 ELF3P78545 371 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 KRT76Q01546 638 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 SEPT7Q16181 437 aaKnown RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 PACS1Q6VY07 963 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 NLRX1Q86UT6 975 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 BRSK1Q8TDC3 778 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 TCP11Q8WWU5 503 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 WNK4Q96J92 1243 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 C9orf72Q96LT7 481 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 C11orf70Q9BRQ4 267 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 MOV10L1Q9BXT6 1211 aaKnown RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 CCDC134Q9H6E4 229 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 C1orf112Q9NSG2 853 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 RIPK3Q9Y572 518 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 PCDHA10Q9Y5I2 948 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 ABCB7O75027 752 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 GAS8O95995 478 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 CLTAP09496 248 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 CETPP11597 493 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 BRAFP15056 766 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 ACOT2P49753 483 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 CCDC63Q8NA47 563 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 SLCO2A1Q92959 643 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 SERPINB12Q96P63 405 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 NSRP1Q9H0G5 558 aaKnown RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 KLHL11Q9NVR0 708 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 NINJ2Q9NZG7 142 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 BAIAP2L1Q9UHR4 511 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 AGAP1Q9UPQ3 857 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 WDR46O15213 610 aaKnown RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 CD58P19256 250 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 GARTP22102 1010 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 SFNP31947 248 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 ATP6V1E1P36543 226 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 TAS2R40P59535 323 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 RAC1P63000 192 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 GCNT1Q02742 428 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 PTK6Q13882 451 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 ANKS1BQ7Z6G8 1248 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 USP37Q86T82 979 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 NRSN1Q8IZ57 195 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 NTPCRQ9BSD7 190 aaKnown RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 ELAC1Q9H777 363 aaKnown RBP12.34□□□□□ -0.43
SYNE2-207ENST00000458046 PCDHB2Q9Y5E7 798 aa12.34□□□□□ -0.43
SYNE2-207ENST00000458046 TNRC18O15417 2968 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-207ENST00000458046 ZBBXA8MT70 800 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 SKAP2O75563 359 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-207ENST00000458046 UBOX5O94941 541 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 CYP17A1P05093 508 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 GTF2H1P32780 548 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 DSG3P32926 999 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 SESN3P58005 492 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 SEPT6Q14141 434 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 ZNF365Q70YC5 407 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 GALNT13Q8IUC8 556 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 NIM1KQ8IY84 436 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 NAXEQ8NCW5 288 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 FNBP1Q96RU3 617 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 SEPT9Q9UHD8 586 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-207ENST00000458046 SLC12A4Q9UP95 1085 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 ZNF646O15015 1829 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-207ENST00000458046 WNT10BO00744 389 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 MGRN1O60291 552 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 PROSCO94903 275 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 APBB3O95704 486 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 FBXO45P0C2W1 286 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 CCNCP24863 283 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 HP1BP3Q5SSJ5 553 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-207ENST00000458046 KAZNQ674X7 775 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 SPATC1Q76KD6 591 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 GSTA5Q7RTV2 222 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 SRRM1Q8IYB3 904 aaKnown RBP12.33□□□□□ -0.44
SYNE2-207ENST00000458046 GRK7Q8WTQ7 553 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 DNAI2Q9GZS0 605 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
SYNE2-207ENST00000458046 ANLNQ9NQW6 1124 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 ADAM22Q9P0K1 906 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 NAALADL1Q9UQQ1 740 aa12.33□□□□□ -0.44
SYNE2-207ENST00000458046 USP15Q9Y4E8 981 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-207ENST00000458046 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
SYNE2-207ENST00000458046 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
SYNE2-207ENST00000458046 NR3C2P08235 984 aa12.32□□□□□ -0.44
SYNE2-207ENST00000458046 NF2P35240 595 aa12.32□□□□□ -0.44
SYNE2-207ENST00000458046 SLC1A1P43005 524 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms