RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 MYH15Q9Y2K3 1946 aa17.02■□□□□ 0.31
LSS-205ENST00000457828 SERPINB4P48594 390 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 APLP1P51693 650 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 FMO1Q01740 532 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 DCAF4L1Q3SXM0 396 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 DEPDC1BQ8WUY9 529 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 SPOCK2Q92563 424 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 FOXP3Q9BZS1 431 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
LSS-205ENST00000457828 PPP1R12AO14974 1030 aaPredicted RBP17.01■□□□□ 0.31
LSS-205ENST00000457828 VHLP40337 213 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 ARL1P40616 181 aaPredicted RBP17.01■□□□□ 0.31
LSS-205ENST00000457828 GSCP56915 257 aaPredicted RBP17.01■□□□□ 0.31
LSS-205ENST00000457828 MRPS9P82933 396 aaKnown RBP17.01■□□□□ 0.31
LSS-205ENST00000457828 ELMOD1Q8N336 334 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 TEX9Q8N6V9 391 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 NSL1Q96IY1 281 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 YME1L1Q96TA2 773 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 DNPEPQ9ULA0 475 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 KRT3P12035 628 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 ECHS1P30084 290 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 GTF2H1P32780 548 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 SATB1Q01826 763 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 ARID3BQ8IVW6 561 aaPredicted RBP17.01■□□□□ 0.31
LSS-205ENST00000457828 CDKL2Q92772 493 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 HPDLQ96IR7 371 aa17.01■□□□□ 0.31
LSS-205ENST00000457828 RPLP2P05387 115 aaKnown RBP17■□□□□ 0.31
LSS-205ENST00000457828 KRT7P08729 469 aa17■□□□□ 0.31
LSS-205ENST00000457828 ZCCHC18P0CG32 403 aa17■□□□□ 0.31
LSS-205ENST00000457828 ETS1P14921 441 aa17■□□□□ 0.31
LSS-205ENST00000457828 RPA3P35244 121 aaPredicted RBP17■□□□□ 0.31
LSS-205ENST00000457828 ARL4AP40617 200 aa17■□□□□ 0.31
LSS-205ENST00000457828 MAML3Q96JK9 1138 aa17■□□□□ 0.31
LSS-205ENST00000457828 DCLRE1BQ9H816 532 aa17■□□□□ 0.31
LSS-205ENST00000457828 C10orf88Q9H8K7 445 aa17■□□□□ 0.31
LSS-205ENST00000457828 UBQLN1Q9UMX0 589 aaKnown RBP17■□□□□ 0.31
LSS-205ENST00000457828 CFLARO15519 480 aa17■□□□□ 0.31
LSS-205ENST00000457828 ZC3H11AO75152 810 aaKnown RBP eCLIP17■□□□□ 0.312e-7■■■□□ 15.4
LSS-205ENST00000457828 KRT38O76015 456 aa17■□□□□ 0.31
LSS-205ENST00000457828 MAP3K6O95382 1288 aa17■□□□□ 0.31
LSS-205ENST00000457828 RBP3P10745 1247 aa17■□□□□ 0.31
LSS-205ENST00000457828 CALB2P22676 271 aa17■□□□□ 0.31
LSS-205ENST00000457828 ADRA1DP25100 572 aa17■□□□□ 0.31
LSS-205ENST00000457828 CDH6P55285 790 aa17■□□□□ 0.31
LSS-205ENST00000457828 AP2B1P63010 937 aa17■□□□□ 0.31
LSS-205ENST00000457828 VEPH1Q14D04 833 aa17■□□□□ 0.31
LSS-205ENST00000457828 LARP7Q4G0J3 582 aaKnown RBP eCLIP17■□□□□ 0.31
LSS-205ENST00000457828 ATP13A4Q4VNC1 1196 aa17■□□□□ 0.31
LSS-205ENST00000457828 ST13P4Q8IZP2 240 aaPredicted RBP17■□□□□ 0.31
LSS-205ENST00000457828 FAM71DQ8N9W8 422 aa17■□□□□ 0.31
LSS-205ENST00000457828 CCNYQ8ND76 341 aa17■□□□□ 0.31
LSS-205ENST00000457828 PIP4K2CQ8TBX8 421 aa17■□□□□ 0.31
LSS-205ENST00000457828 CLEC4DQ8WXI8 215 aa17■□□□□ 0.31
LSS-205ENST00000457828 RNPEPL1Q9HAU8 725 aa17■□□□□ 0.31
LSS-205ENST00000457828 FAM49BQ9NUQ9 324 aa17■□□□□ 0.31
LSS-205ENST00000457828 C4AP0C0L4 1744 aa17■□□□□ 0.31
LSS-205ENST00000457828 CABYRO75952 493 aa17■□□□□ 0.31
LSS-205ENST00000457828 BRD2P25440 801 aaKnown RBP17■□□□□ 0.31
LSS-205ENST00000457828 CLK2P49760 499 aaKnown RBP17■□□□□ 0.31
LSS-205ENST00000457828 COG7P83436 770 aa17■□□□□ 0.31
LSS-205ENST00000457828 MIPOL1Q8TD10 442 aa17■□□□□ 0.31
LSS-205ENST00000457828 PARD3BQ8TEW8 1205 aa17■□□□□ 0.31
LSS-205ENST00000457828 SH3TC2Q8TF17 1288 aa17■□□□□ 0.31
LSS-205ENST00000457828 ZNF317Q96PQ6 595 aaPredicted RBP17■□□□□ 0.31
LSS-205ENST00000457828 TBC1D10AQ9BXI6 508 aa17■□□□□ 0.31
LSS-205ENST00000457828 LRRC19Q9H756 370 aa17■□□□□ 0.31
LSS-205ENST00000457828 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
LSS-205ENST00000457828 RAB6BQ9NRW1 208 aa17■□□□□ 0.31
LSS-205ENST00000457828 ITGB4P16144 1822 aa17■□□□□ 0.31
LSS-205ENST00000457828 NRCAMQ92823 1304 aa17■□□□□ 0.31
LSS-205ENST00000457828 ADRB2P07550 413 aa17■□□□□ 0.31
LSS-205ENST00000457828 APRTP07741 180 aa17■□□□□ 0.31
LSS-205ENST00000457828 PTK6Q13882 451 aa17■□□□□ 0.31
LSS-205ENST00000457828 SH3D19Q5HYK7 790 aa17■□□□□ 0.31
LSS-205ENST00000457828 PIGWQ7Z7B1 504 aa17■□□□□ 0.31
LSS-205ENST00000457828 FBXO36Q8NEA4 188 aa17■□□□□ 0.31
LSS-205ENST00000457828 STK32AQ8WU08 396 aa17■□□□□ 0.31
LSS-205ENST00000457828 PPP2R3CQ969Q6 453 aa17■□□□□ 0.31
LSS-205ENST00000457828 LENG1Q96BZ8 264 aaPredicted RBP17■□□□□ 0.31
LSS-205ENST00000457828 SHCBP1LQ9BZQ2 653 aa17■□□□□ 0.31
LSS-205ENST00000457828 SMYD2Q9NRG4 433 aa17■□□□□ 0.31
LSS-205ENST00000457828 CPSF3Q9UKF6 684 aaKnown RBP17■□□□□ 0.31
LSS-205ENST00000457828 MYH13Q9UKX3 1938 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 PTGIRP43119 386 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 SNRPFP62306 86 aaKnown RBP16.99■□□□□ 0.31
LSS-205ENST00000457828 HTRA3P83110 453 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 PAFAH2Q99487 392 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 VAV3Q9UKW4 847 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 R3HDM2Q9Y2K5 976 aaKnown RBP16.99■□□□□ 0.31
LSS-205ENST00000457828 SOWAHBA6NEL2 793 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 CCL23P55773 120 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 AMHR2Q16671 573 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 FAXCQ5TGI0 409 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 SPATA2LQ8IUW3 424 aaPredicted RBP16.99■□□□□ 0.31
LSS-205ENST00000457828 MTMR12Q9C0I1 747 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 DDX56Q9NY93 547 aaKnown RBP16.99■□□□□ 0.31
LSS-205ENST00000457828 ZNF112Q9UJU3 913 aa16.99■□□□□ 0.31
LSS-205ENST00000457828 APOBEC2Q9Y235 224 aaKnown RBP16.99■□□□□ 0.31
LSS-205ENST00000457828 PSTPIP1O43586 416 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms