RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 LSM14BQ9BX40 385 aaKnown RBP10.65□□□□□ -0.7
ATG4A-206ENST00000457035 DUSP16Q9BY84 665 aa10.65□□□□□ -0.7
ATG4A-206ENST00000457035 GANQ9H2C0 597 aa10.65□□□□□ -0.7
ATG4A-206ENST00000457035 ASAH2Q9NR71 780 aa10.65□□□□□ -0.7
ATG4A-206ENST00000457035 IL37Q9NZH6 218 aa10.65□□□□□ -0.7
ATG4A-206ENST00000457035 MRPS23Q9Y3D9 190 aaKnown RBP10.65□□□□□ -0.7
ATG4A-206ENST00000457035 FHOD1Q9Y613 1164 aa10.65□□□□□ -0.7
ATG4A-206ENST00000457035 F5P12259 2224 aa10.65□□□□□ -0.71
ATG4A-206ENST00000457035 PRR33A8MZF0 331 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 C2CD4DB7Z1M9 353 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 GOLGA6L19H0YKK7 550 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 O00370 1275 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 EPHB6O15197 1021 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 FAM200BP0CF97 657 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 MYL4P12829 197 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 LAMP2P13473 410 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 CD19P15391 556 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 GJA1P17302 382 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 SP100P23497 879 aaPredicted RBP10.64□□□□□ -0.71
ATG4A-206ENST00000457035 ANXA13P27216 316 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 CLCN1P35523 988 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 MAP3K7CLP57077 242 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 USP46P62068 366 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 FANCCQ00597 558 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 DRAP1Q14919 205 aaPredicted RBP10.64□□□□□ -0.71
ATG4A-206ENST00000457035 VEPH1Q14D04 833 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 PKDCCQ504Y2 493 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 SGO2Q562F6 1265 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 LCLAT1Q6UWP7 414 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 DENND5BQ6ZUT9 1274 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 PDZD4Q76G19 769 aaPredicted RBP10.64□□□□□ -0.71
ATG4A-206ENST00000457035 TTC30AQ86WT1 665 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 FAM71AQ8IYT1 594 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 NUP93Q8N1F7 819 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 TTLL2Q9BWV7 592 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 STK33Q9BYT3 514 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 UBXN6Q9BZV1 441 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 DMAP1Q9NPF5 467 aaPredicted RBP10.64□□□□□ -0.71
ATG4A-206ENST00000457035 ACP6Q9NPH0 428 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 KRT82Q9NSB4 513 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 EPS15L1Q9UBC2 864 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 CDH7Q9ULB5 785 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 NR2E1Q9Y466 385 aa10.64□□□□□ -0.71
ATG4A-206ENST00000457035 MYOFQ9NZM1 2061 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 A0A1W2PRU2 124 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 FAM92AA1XBS5 289 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 CYP26A1O43174 497 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 DCXO43602 365 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 FGF19O95750 216 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 SERPINC1P01008 464 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 KRT5P13647 590 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 NPR3P17342 541 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 CEBPBP17676 345 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 RFX1P22670 979 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 BRD2P25440 801 aaKnown RBP10.63□□□□□ -0.71
ATG4A-206ENST00000457035 GABRR2P28476 465 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 GBP2P32456 591 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-206ENST00000457035 USP8P40818 1118 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 POLR2FP61218 127 aaKnown RBP10.63□□□□□ -0.71
ATG4A-206ENST00000457035 TPM4P67936 248 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 TAF12Q16514 161 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 PTPN21Q16825 1174 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 FILIP1LQ4L180 1135 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 GET4Q7L5D6 327 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-206ENST00000457035 NPAS3Q8IXF0 933 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 ZDHHC14Q8IZN3 488 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 RNF214Q8ND24 703 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 SCAMP5Q8TAC9 235 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 ZNF606Q8WXB4 792 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 ING5Q8WYH8 240 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 ACSF2Q96CM8 615 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-206ENST00000457035 MCRS1Q96EZ8 462 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 ZSWIM3Q96MP5 696 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 PNPLA8Q9NP80 782 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 FAM207AQ9NSI2 230 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-206ENST00000457035 GDE1Q9NZC3 331 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 LIMD1Q9UGP4 676 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 TSPAN16Q9UKR8 245 aa10.63□□□□□ -0.71
ATG4A-206ENST00000457035 MAGED2Q9UNF1 606 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-206ENST00000457035 ZFP37Q9Y6Q3 630 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-206ENST00000457035 KMT2EQ8IZD2 1858 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 NUP210Q8TEM1 1887 aaPredicted RBP10.62□□□□□ -0.71
ATG4A-206ENST00000457035 MYO16Q9Y6X6 1858 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 A0A1W2PQC6 194 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 ANHXE9PGG2 379 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 TULP2O00295 520 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 TADA3O75528 432 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 RTN3O95197 1032 aaPredicted RBP10.62□□□□□ -0.71
ATG4A-206ENST00000457035 PNMA6AP0CW24 399 aaPredicted RBP10.62□□□□□ -0.71
ATG4A-206ENST00000457035 CDC25CP30307 473 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 PBX1P40424 430 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 KIF11P52732 1056 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 UBASH3AP57075 661 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 JAM2P57087 298 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 PDE4CQ08493 712 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 TAF10Q12962 218 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 RAPGEF1Q13905 1077 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 STILQ15468 1287 aa10.62□□□□□ -0.71
ATG4A-206ENST00000457035 TEAD2Q15562 447 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms