RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PDZD8Q8NEN9 1154 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 CEP63Q96MT8 703 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 TWNKQ96RR1 684 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 EBF3Q9H4W6 596 aa17.2■□□□□ 0.34
CPSF6-203ENST00000456847 FAM200BP0CF97 657 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 PFKLP17858 780 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 NBL1P41271 181 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 MAP3K7CLP57077 242 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 RUNX3Q13761 415 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 LRRC32Q14392 662 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 ZNF77Q15935 545 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 CBWD6Q4V339 395 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 CBWD3Q5JTY5 395 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 CBWD5Q5RIA9 395 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 RIN3Q8TB24 985 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 SH3RF2Q8TEC5 729 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 JAKMIP2Q96AA8 810 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 LMAN1LQ9HAT1 526 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 METTL14Q9HCE5 456 aaKnown RBP17.19■□□□□ 0.34
CPSF6-203ENST00000456847 ZNF840PA6NDX5 716 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 CILPO75339 1184 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 ARSAP15289 507 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 PON2Q15165 354 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 PDGFRLQ15198 375 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 ZNF394Q53GI3 561 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 FAM83CQ9BQN1 747 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 HPS4Q9NQG7 708 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 DUS2Q9NX74 493 aaKnown RBP17.19■□□□□ 0.34
CPSF6-203ENST00000456847 ARHGAP26Q9UNA1 814 aa17.19■□□□□ 0.34
CPSF6-203ENST00000456847 PPP1R3GB7ZBB8 358 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 GFRA3O60609 400 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 SP9P0CG40 484 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 BMP6P22004 513 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 STX17P56962 302 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 MCCD1P59942 119 aaPredicted RBP17.18■□□□□ 0.34
CPSF6-203ENST00000456847 PAK1Q13153 545 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 CAMK4Q16566 473 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 CPA6Q8N4T0 437 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 TTC39CQ8N584 583 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 SCAMP5Q8TAC9 235 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 OVCA2Q8WZ82 227 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 CYFIP2Q96F07 1278 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 SMOQ99835 787 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 CHRDQ9H2X0 955 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 WNT6Q9Y6F9 365 aa17.18■□□□□ 0.34
CPSF6-203ENST00000456847 MBL2P11226 248 aaPredicted RBP17.17■□□□□ 0.34
CPSF6-203ENST00000456847 CSTF1Q05048 431 aaKnown RBP17.17■□□□□ 0.34
CPSF6-203ENST00000456847 FZD5Q13467 585 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 TTI2Q6NXR4 508 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 ZC3H14Q6PJT7 736 aaKnown RBP17.17■□□□□ 0.34
CPSF6-203ENST00000456847 TXNDC11Q6PKC3 985 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 FILIP1Q7Z7B0 1213 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 NKD2Q969F2 451 aaPredicted RBP17.17■□□□□ 0.34
CPSF6-203ENST00000456847 SLC35C1Q96A29 364 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 FAXDC2Q96IV6 333 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 HNRNPABQ99729 332 aaKnown RBP17.17■□□□□ 0.34
CPSF6-203ENST00000456847 DUSP9Q99956 384 aaKnown RBP17.17■□□□□ 0.34
CPSF6-203ENST00000456847 CISHQ9NSE2 258 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 CPQQ9Y646 472 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 CACNA1HO95180 2353 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 BEST1O76090 585 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 MTAPQ13126 283 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 ZNF687Q8N1G0 1237 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 TRIML1Q8N9V2 468 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 ZMIZ2Q8NF64 920 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 OSCP1Q8WVF1 389 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 TATDN2Q93075 761 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 ATP2A3Q93084 1043 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 HEXIM2Q96MH2 286 aaKnown RBP17.17■□□□□ 0.34
CPSF6-203ENST00000456847 ARID3AQ99856 593 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 IER2Q9BTL4 223 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 COMMD8Q9NX08 183 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 SMPD4Q9NXE4 827 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 GMIPQ9P107 970 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 FBXO4Q9UKT5 387 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 R4GN57 208 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 F5P12259 2224 aa17.17■□□□□ 0.34
CPSF6-203ENST00000456847 CACNA1IQ9P0X4 2223 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 PROB1E7EW31 1015 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 LEFTY2O00292 366 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 TNFRSF10BO14763 440 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 OAS1P00973 400 aaKnown RBP17.16■□□□□ 0.34
CPSF6-203ENST00000456847 CHRNB1P11230 501 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 AMPD2Q01433 879 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 NACA2Q9H009 215 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 FBXO44Q9H4M3 255 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 CSNK1G1Q9HCP0 422 aa17.16■□□□□ 0.34
CPSF6-203ENST00000456847 RBM12Q9NTZ6 932 aaKnown RBP17.16■□□□□ 0.34
CPSF6-203ENST00000456847 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
CPSF6-203ENST00000456847 TCF3P15923 654 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 FMO5P49326 533 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 YWHAEP62258 255 aaKnown RBP17.15■□□□□ 0.34
CPSF6-203ENST00000456847 SLC7A9P82251 487 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 LRMPQ12912 555 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 DGKKQ5KSL6 1271 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 HECTD3Q5T447 861 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 CLEC20AQ6ZU45 233 aa17.15■□□□□ 0.34
CPSF6-203ENST00000456847 MAML2Q8IZL2 1156 aaPredicted RBP17.15■□□□□ 0.34
CPSF6-203ENST00000456847 RNF38Q9H0F5 515 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms