RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CCDC6Q16204 474 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 RNASEH2BQ5TBB1 312 aaKnown RBP4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 TMCO4Q5TGY1 634 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 IZUMO3Q5VZ72 239 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 C11orf63Q6NUN7 778 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 NEPROQ6NW34 567 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 DCDC5Q6ZRR9 648 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 INTS8Q75QN2 995 aaKnown RBP4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 TRMT10CQ7L0Y3 403 aaKnown RBP4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 PIWIL3Q7Z3Z3 882 aaKnown RBP4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 DEPTORQ8TB45 409 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 CPT1BQ92523 772 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 IFT74Q96LB3 600 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 STRA6Q9BX79 667 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 MRPL1Q9BYD6 325 aaKnown RBP4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 TMEM117Q9H0C3 514 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 SYNCQ9H7C4 482 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 PCDH12Q9NPG4 1184 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 AGPAT3Q9NRZ7 376 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 NCKIPSDQ9NZQ3 722 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 SELENONQ9NZV5 590 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 EMCNQ9ULC0 261 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 FARP1Q9Y4F1 1045 aaPredicted RBP4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 PLCE1Q9P212 2302 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 EXOC1LA0A1B0GW35 172 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SH3PXD2BA1X283 911 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 USP17L10C9JJH3 530 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CRTAMO95727 393 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 LDHAP00338 332 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 POTEJP0CG39 1038 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PABPC1P11940 636 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 UQCRBP14927 111 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PORP16435 677 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 FSHRP23945 695 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CALML3P27482 149 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 EPHX2P34913 555 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 THOP1P52888 689 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CSE1LP55060 971 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PPIDQ08752 370 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SELENBP1Q13228 472 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 FAM209AQ5JX71 171 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 FBXO33Q7Z6M2 555 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SDCCAG8Q86SQ7 713 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CBWD2Q8IUF1 395 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TP53I13Q8NBR0 393 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 GIPC3Q8TF64 312 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SHC3Q92529 594 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 NSL1Q96IY1 281 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PKP2Q99959 881 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CCDC106Q9BWC9 280 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TRIM8Q9BZR9 551 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 FAM192AQ9GZU8 254 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 METTL14Q9HCE5 456 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TXLNGQ9NUQ3 528 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 ZNRF3Q9ULT6 936 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 BOLA1Q9Y3E2 137 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 IVNS1ABPQ9Y6Y0 642 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PDE8AO60658 829 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 STAMBPO95630 424 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 NTSR2O95665 410 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CAPNS1P04632 268 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 UNGP13051 313 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TM4SF1P30408 202 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CYP2J2P51589 502 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SOX10P56693 466 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 IRX4P78413 519 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 ITPK1Q13572 414 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 C16orf72Q14CZ0 275 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 NRF1Q16656 503 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 UNC45BQ8IWX7 931 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PALM2Q8IXS6 379 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CPA5Q8WXQ8 436 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 MKL1Q969V6 931 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TP53INP1Q96A56 240 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TTC17Q96AE7 1141 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 IWS1Q96ST2 819 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 KIFC3Q9BVG8 833 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 S100A14Q9HCY8 104 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SAYSD1Q9NPB0 183 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PIH1D1Q9NWS0 290 aaKnown RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 MAD1L1Q9Y6D9 718 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CSPG5O95196 566 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 GAS8O95995 478 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 ADRB2P07550 413 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CCDC166P0CW27 439 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 AKR1B1P15121 316 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 IL1R2P27930 398 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 CD68P34810 354 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 ADCY7P51828 1080 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 GNA12Q03113 381 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PTP4A2Q12974 167 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 BNIP3Q12983 259 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 TMED1Q13445 227 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 PPP2R5BQ15173 497 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 NKX1-1Q15270 411 aaPredicted RBP4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 GSTA3Q16772 222 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 SGO2Q562F6 1265 aa4.74□□□□□ -1.65
DEPDC1-202ENST00000456315 KCNT1Q5JUK3 1230 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms