RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 FAM25GB3EWG6 89 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 GSC2O15499 205 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 CHRNB3Q05901 458 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 ABCB5Q2M3G0 1257 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 DENND5BQ6ZUT9 1274 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 ELMO2Q96JJ3 720 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 POP1Q99575 1024 aaKnown RBP12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 USP17L10C9JJH3 530 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 GDF11O95390 407 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 P4HBP07237 508 aaKnown RBP12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 TBXAS1P24557 533 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 TRAF3Q13114 568 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 AGKQ53H12 422 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 SPDYCQ5MJ68 293 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 HTRA1Q92743 480 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 FAXDC2Q96IV6 333 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 FAM53CQ9NYF3 392 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 CIDEBQ9UHD4 219 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 CDC42BPAQ5VT25 1732 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 ZNF804BA4D1E1 1349 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 A0A0A6YYK5 440 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 MAP3K6O95382 1288 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 SGPL1O95470 568 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 CCNA2P20248 432 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 SLC1A6P48664 564 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 PRELPP51888 382 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 C19orf18Q8NEA5 215 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 SKA1Q96BD8 255 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 LMTK3Q96Q04 1460 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 A0A087X0B3 334 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 UBA6A0AVT1 1052 aaPredicted RBP12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 CES2O00748 559 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 ZBTB5O15062 677 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 TTKP33981 857 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 GLRBP48167 497 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 RALGDSQ12967 914 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 ANO7Q6IWH7 933 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 HAUS6Q7Z4H7 955 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 TDRD5Q8NAT2 981 aaKnown RBP12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 SH2D3AQ9BRG2 576 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 EBF2Q9HAK2 575 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 SERPINB13Q9UIV8 391 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 SEC24AO95486 1093 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 TPBGLP0DKB5 382 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 AMIGO2Q86SJ2 522 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 DHFR2Q86XF0 187 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 CLPTM1LQ96KA5 538 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 FAM20AQ96MK3 541 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 CASS4Q9NQ75 786 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 LRRC4BQ9NT99 713 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 AGAP1Q9UPQ3 857 aa12.77□□□□□ -0.36
NEDD4L-208ENST00000456173 VCLP18206 1134 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 KCNQ4P56696 695 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 FCHO2Q0JRZ9 810 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 ITGA7Q13683 1181 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 LDLRAP1Q5SW96 308 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 RTKN2Q8IZC4 609 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 SYNE4Q8N205 404 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 JMJD4Q9H9V9 463 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 DCP1AQ9NPI6 582 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 TMEM161AQ9NX61 479 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 RNF225M0QZC1 329 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 INPP4BO15327 924 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 STX7O15400 261 aaKnown RBP12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 NUDT17P0C025 328 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 CSE1LP55060 971 aaKnown RBP12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 TAP1Q03518 808 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 GRIK3Q13003 919 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 SYDE2Q5VT97 1194 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 OR7A2PQ8NGA2 310 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 ENKURQ8TC29 256 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 CCDC28BQ9BUN5 200 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 THUMPD3Q9BV44 507 aaKnown RBP12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 VPS33BQ9H267 617 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 KCNK4Q9NYG8 393 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 GH1P01241 217 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 ETFBP38117 255 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 IREB2P48200 963 aaKnown RBP12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 KCNT1Q5JUK3 1230 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 SLFN12LQ6IEE8 588 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 OR6B3Q8NGW1 331 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 PDCD6IPQ8WUM4 868 aaKnown RBP12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 APOPT1Q96IL0 206 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 ZNF556Q9HAH1 456 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 DCDC2Q9UHG0 476 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 GMEB1Q9Y692 573 aa12.77□□□□□ -0.37
NEDD4L-208ENST00000456173 NR5A2O00482 541 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 KRT6BP04259 564 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 POLBP06746 335 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 CPA3P15088 417 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 KRT6CP48668 564 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 AP3B2Q13367 1082 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 UBAP2LQ14157 1087 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 SLC27A3Q5K4L6 730 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 CENPPQ6IPU0 288 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 ALYREFQ86V81 257 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms