RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 CYP3A43Q9HB55 503 aa18.8■□□□□ 0.6
COL13A1-206ENST00000456019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL13A1-206ENST00000456019 RBM12Q9NTZ6 932 aaKnown RBP18.8■□□□□ 0.6
COL13A1-206ENST00000456019 DUS2Q9NX74 493 aaKnown RBP18.8■□□□□ 0.6
COL13A1-206ENST00000456019 ZNF638Q14966 1978 aaKnown RBP18.79■□□□□ 0.6
COL13A1-206ENST00000456019 AP1G2O75843 785 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 ABL1P00519 1130 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 IFNAR2P48551 515 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 NRLP54845 237 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 INCA1Q0VD86 236 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 IFRD2Q12894 506 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-206ENST00000456019 ORC1Q13415 861 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 CCINQ13939 588 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 GAS6Q14393 721 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 WDR44Q5JSH3 913 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 ELOA2Q8IYF1 753 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-206ENST00000456019 CPA6Q8N4T0 437 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 ZBTB44Q8NCP5 570 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 PDZD8Q8NEN9 1154 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 OVCA2Q8WZ82 227 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 ERCC4Q92889 916 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-206ENST00000456019 ATP2A3Q93084 1043 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 EEF2KMTQ96G04 330 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 NIF3L1Q9GZT8 377 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 APOBEC3GQ9HC16 384 aaKnown RBP18.79■□□□□ 0.6
COL13A1-206ENST00000456019 KRT82Q9NSB4 513 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 HMGXB4Q9UGU5 601 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 F5P12259 2224 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 CACNA1IQ9P0X4 2223 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 DMDP11532 3685 aa18.79■□□□□ 0.6
COL13A1-206ENST00000456019 OTOL1A6NHN0 477 aaPredicted RBP18.78■□□□□ 0.6
COL13A1-206ENST00000456019 SLC16A3O15427 465 aaKnown RBP18.78■□□□□ 0.6
COL13A1-206ENST00000456019 CCDC130P13994 396 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 CXCL12P48061 93 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 SLC7A9P82251 487 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 FKBP3Q00688 224 aaKnown RBP18.78■□□□□ 0.6
COL13A1-206ENST00000456019 GRSF1Q12849 480 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL13A1-206ENST00000456019 SLC2A14Q8TDB8 520 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 FBXO32Q969P5 355 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 EXOC4Q96A65 974 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 DNAI2Q9GZS0 605 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 ECT2Q9H8V3 914 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 COMMD8Q9NX08 183 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 WNT6Q9Y6F9 365 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 ANAPC1Q9H1A4 1944 aa18.78■□□□□ 0.6
COL13A1-206ENST00000456019 LEFTY2O00292 366 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 TRDMT1O14717 391 aaKnown RBP18.77■□□□□ 0.6
COL13A1-206ENST00000456019 TNFRSF10BO14763 440 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 OLFM2O95897 454 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 OAS1P00973 400 aaKnown RBP18.77■□□□□ 0.6
COL13A1-206ENST00000456019 TDGF1P13385 188 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 MXI1P50539 228 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 SLC5A3P53794 718 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 LRRC63Q05C16 580 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 STIM1Q13586 685 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 EML3Q32P44 896 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 TMEM196Q5HYL7 178 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 ANKRD40Q6AI12 368 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 Q6ZS52 159 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 ZC3H3Q8IXZ2 948 aaKnown RBP18.77■□□□□ 0.6
COL13A1-206ENST00000456019 KIAA1958Q8N8K9 716 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 C12orf29Q8N999 325 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 FBXL13Q8NEE6 735 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 SCAMP5Q8TAC9 235 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 FAXDC2Q96IV6 333 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 SMOQ99835 787 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 NT5C1AQ9BXI3 368 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 RNF38Q9H0F5 515 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 CSNK1G1Q9HCP0 422 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 FAM49BQ9NUQ9 324 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 IL37Q9NZH6 218 aa18.77■□□□□ 0.6
COL13A1-206ENST00000456019 CIZ1Q9ULV3 898 aaPredicted RBP18.77■□□□□ 0.6
COL13A1-206ENST00000456019 FANCMQ8IYD8 2048 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 LILRB5O75023 590 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 PAPSS2O95340 614 aaPredicted RBP18.76■□□□□ 0.59
COL13A1-206ENST00000456019 GJA4P35212 333 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 SATB1Q01826 763 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 NR1H3Q13133 447 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 CHFRQ96EP1 664 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 TWNKQ96RR1 684 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 HNRNPABQ99729 332 aaKnown RBP18.76■□□□□ 0.59
COL13A1-206ENST00000456019 RAB20Q9NX57 234 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 CPQQ9Y646 472 aa18.76■□□□□ 0.59
COL13A1-206ENST00000456019 PSMA7O14818 248 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 CILPO75339 1184 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 NFATC1O95644 943 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 FAM200BP0CF97 657 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 CD58P19256 250 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 PPP1R2P41236 205 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 PMS1P54277 932 aaKnown RBP18.75■□□□□ 0.59
COL13A1-206ENST00000456019 MAP3K7CLP57077 242 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 ZXDBP98169 803 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 DCAF17Q5H9S7 520 aaPredicted RBP18.75■□□□□ 0.59
COL13A1-206ENST00000456019 TCERG1LQ5VWI1 586 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 SNX30Q5VWJ9 437 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 FSTL4Q6MZW2 842 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 DDX42Q86XP3 938 aaKnown RBP eCLIP18.75■□□□□ 0.59
COL13A1-206ENST00000456019 TTC39CQ8N584 583 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 SUMF1Q8NBK3 374 aa18.75■□□□□ 0.59
COL13A1-206ENST00000456019 ZMIZ2Q8NF64 920 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms