RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 ADAM15Q13444 863 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 CCDC122Q5T0U0 273 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 LIN9Q5TKA1 542 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 TMEM184AQ6ZMB5 413 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 CCDC149Q6ZUS6 474 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 VPS36Q86VN1 386 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 PHF13Q86YI8 300 aaPredicted RBP11.33□□□□□ -0.6
SYPL1-202ENST00000455385 SCUBE3Q8IX30 993 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 CCDC170Q8IYT3 715 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 EFHBQ8N7U6 833 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 HDAC7Q8WUI4 952 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 HSFY1Q96LI6 401 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 GAS2L1Q99501 681 aaPredicted RBP11.33□□□□□ -0.6
SYPL1-202ENST00000455385 PNPLA8Q9NP80 782 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 MTMR10Q9NXD2 777 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 IL37Q9NZH6 218 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 REXO2Q9Y3B8 237 aaKnown RBP11.33□□□□□ -0.6
SYPL1-202ENST00000455385 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
SYPL1-202ENST00000455385 SLC38A8A6NNN8 435 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 CCL16O15467 120 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 RTN2O75298 545 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 NDUFA10O95299 355 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 LCA5LO95447 670 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 LCP1P13796 627 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 HMGA1P17096 107 aaKnown RBP11.32□□□□□ -0.6
SYPL1-202ENST00000455385 ANXA13P27216 316 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 PGFP49763 221 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 TKTL1P51854 596 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 CYP4A22Q5TCH4 519 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 MMS22LQ6ZRQ5 1243 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 MON1BQ7L1V2 547 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 DNAJB7Q7Z6W7 309 aaPredicted RBP11.32□□□□□ -0.6
SYPL1-202ENST00000455385 PHLDB2Q86SQ0 1253 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 ERICH1Q86X53 443 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 MCOLN2Q8IZK6 566 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 NUP93Q8N1F7 819 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 CLEC4CQ8WTT0 213 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 PPP2R3CQ969Q6 453 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 PACSIN1Q9BY11 444 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 USP3Q9Y6I4 520 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
SYPL1-202ENST00000455385 EIF3CLB5ME19 914 aaKnown RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 PAPSS1O43252 624 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 NSFP46459 744 aaKnown RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 GABRB2P47870 512 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 DLX2Q07687 328 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 ADIGQ0VDE8 80 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 IFRD2Q12894 506 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 CTC1Q2NKJ3 1217 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 PPM1LQ5SGD2 360 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 TOGARAM2Q6ZUX3 1019 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 MICALL1Q8N3F8 863 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 CCDC112Q8NEF3 446 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 ZNF707Q96C28 371 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 C18orf8Q96DM3 657 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 EIF3CQ99613 913 aaKnown RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 C11orf70Q9BRQ4 267 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 MIS12Q9H081 205 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 LRRC4Q9HBW1 653 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 ADAM22Q9P0K1 906 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 CLEC1BQ9P126 229 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 CHORDC1Q9UHD1 332 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 TFR2Q9UP52 801 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 ZNF638Q14966 1978 aaKnown RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 CCDC195A0A1B0GUA6 201 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 NRG2O14511 850 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 LRG1P02750 347 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 USP17L7P0C7H9 530 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 LTBRP36941 435 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 EPHB3P54753 998 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 GALCP54803 685 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 SYCE2Q6PIF2 218 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 RTL10Q7L3V2 364 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 BHLHA9Q7RTU4 235 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 ACRBPQ8NEB7 543 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 KHSRPQ92945 711 aaKnown RBP eCLIP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 PSMG2Q969U7 264 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 PIWIL1Q96J94 861 aaKnown RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 NOX5Q96PH1 765 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 DESI2Q9BSY9 194 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 LRRC3Q9BY71 257 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 ULBP1Q9BZM6 244 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 ZNF334Q9HCZ1 680 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 CYLDQ9NQC7 956 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 HCFC1R1Q9NWW0 138 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 MAGED2Q9UNF1 606 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-202ENST00000455385 PATJQ8NI35 1801 aa11.31□□□□□ -0.6
SYPL1-202ENST00000455385 A0A0U1RQJ8 604 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 FAM92AA1XBS5 289 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 ARHGAP6O43182 974 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 PAPLNO95428 1278 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 CYLC1P35663 651 aaPredicted RBP11.3□□□□□ -0.6
SYPL1-202ENST00000455385 ACADSBP45954 432 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 COL19A1Q14993 1142 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 TAF5Q15542 800 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 CCDC85BQ15834 202 aaPredicted RBP11.3□□□□□ -0.6
SYPL1-202ENST00000455385 PM20D1Q6GTS8 502 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
SYPL1-202ENST00000455385 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms