RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ST7Q9NRC1 585 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 INSL5Q9Y5Q6 135 aa17.49■□□□□ 0.39
CCDC90B-202ENST00000455220 GREB1Q4ZG55 1949 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 NCANO14594 1321 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 FAM170AA1A519 330 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 CCDC175P0C221 793 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 TMEM253P0C7T8 217 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 MYBL1P10243 752 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 VAV2P52735 878 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 SLC5A3P53794 718 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 CCDC149Q6ZUS6 474 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 THAP2Q9H0W7 228 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 PLEKHA4Q9H4M7 779 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 STRIP2Q9ULQ0 834 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 USP3Q9Y6I4 520 aa17.48■□□□□ 0.39
CCDC90B-202ENST00000455220 PRRG1O14668 218 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 PER2O15055 1255 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 KCNC3Q14003 757 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 GRIN2CQ14957 1233 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 C2CD6Q53TS8 623 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 SDHAF4Q5VUM1 108 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 XYLT1Q86Y38 959 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 ZDHHC17Q8IUH5 632 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 NUP93Q8N1F7 819 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 SCML4Q8N228 414 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 PPP2R3CQ969Q6 453 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 LRCH3Q96II8 777 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 PRDM12Q9H4Q4 367 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 NSUN3Q9H649 340 aaKnown RBP17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 SYNCQ9H7C4 482 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 TLE6Q9H808 572 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 LRRC4Q9HBW1 653 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 AVENQ9NQS1 362 aaPredicted RBP17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 IL37Q9NZH6 218 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 WDR35Q9P2L0 1181 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 HCFC2Q9Y5Z7 792 aa17.47■□□□□ 0.39
CCDC90B-202ENST00000455220 TCRBV5S1A1TA0A578 114 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 RCCD1A6NED2 376 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 PJA2O43164 708 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 PAPSS1O43252 624 aaPredicted RBP17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 C8AP07357 584 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 EPCAMP16422 314 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 POU3F3P20264 500 aaPredicted RBP17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 ABCB4P21439 1286 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 RRM1P23921 792 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 NRIP1P48552 1158 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 TKTL1P51854 596 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 GPC5P78333 572 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 ADIGQ0VDE8 80 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 PLD1Q13393 1074 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 ZNF268Q14587 947 aaPredicted RBP17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 CYP4A22Q5TCH4 519 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 ZNF697Q5TEC3 545 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 LIN9Q5TKA1 542 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 DENND5BQ6ZUT9 1274 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 RBM23Q86U06 439 aaKnown RBP17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 TXLNBQ8N3L3 684 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 SLC7A14Q8TBB6 771 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 CTNNBL1Q8WYA6 563 aaPredicted RBP17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 MCRS1Q96EZ8 462 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 CNGB3Q9NQW8 809 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 MAN1C1Q9NR34 630 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 COMMD8Q9NX08 183 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 DPP7Q9UHL4 492 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 PPP2R2CQ9Y2T4 447 aa17.46■□□□□ 0.39
CCDC90B-202ENST00000455220 PRRC2BQ5JSZ5 2229 aaKnown RBP17.46■□□□□ 0.38
CCDC90B-202ENST00000455220 FAM92AA1XBS5 289 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 PIK3R2O00459 728 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 FBXO21O94952 628 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 CYP1A2P05177 515 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 LCP1P13796 627 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 SCNN1AP37088 669 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 ALDH1A3P47895 512 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 TWF1Q12792 350 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 PM20D1Q6GTS8 502 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 PLEKHA7Q6IQ23 1121 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 OLFML1Q6UWY5 402 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 ZNF662Q6ZS27 426 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 FAM183BPQ6ZVS7 135 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 SIX6OS1Q8N1H7 587 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 C3orf20Q8ND61 904 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 SCAMP5Q8TAC9 235 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 ARHGEF26Q96DR7 871 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 TTLL2Q9BWV7 592 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 LACRTQ9GZZ8 138 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 CNOT8Q9UFF9 292 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 ZNF638Q14966 1978 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 SZT2Q5T011 3432 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 SLC38A8A6NNN8 435 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 BTNL10A8MVZ5 291 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 RTN3O95197 1032 aaPredicted RBP17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 HOXA9P31269 272 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 TCEAL1Q15170 157 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 GPR153Q6NV75 609 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 LLGL2Q6P1M3 1020 aa17.45■□□□□ 0.38
CCDC90B-202ENST00000455220 BHLHA9Q7RTU4 235 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms