RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TNIP3Q96KP6 325 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 NFS1Q9Y697 457 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 E7EVH7 732 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 TRUB2O95900 331 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 POMCP01189 267 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 SCNN1GP51170 649 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 VCPP55072 806 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 LILRA4P59901 499 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 COPS2P61201 443 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 ADAM17P78536 824 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 BASP1P80723 227 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 SLC25A11Q02978 314 aaKnown RBP14.31□□□□□ -0.12
CLK3-203ENST00000454830 FOXR1Q6PIV2 292 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 NPNTQ6UXI9 565 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 MAP7D3Q8IWC1 876 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 LRRN4Q8WUT4 740 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 RBM15Q96T37 977 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■■■■□ 20.2
CLK3-203ENST00000454830 VPS37BQ9H9H4 285 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 LRRC4Q9HBW1 653 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 FAM105AQ9NUU6 356 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 GTF2IRD1Q9UHL9 959 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 Q9Y3F1 56 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 ANK1P16157 1881 aa14.31□□□□□ -0.12
CLK3-203ENST00000454830 I3L4J1 428 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 CCND3P30281 292 aaPredicted RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 CD52P31358 61 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 CCT5P48643 541 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 RABGGTBP53611 331 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 SLC6A3Q01959 620 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 KCNA10Q16322 511 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 NIPA2Q8N8Q9 360 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 DHX35Q9H5Z1 703 aaKnown RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 BHMG1C9JSJ3 638 aaPredicted RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 RBP3P10745 1247 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 AFF1P51825 1210 aaKnown RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 BCAT1P54687 386 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 BST2Q10589 180 aaKnown RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 ZBTB6Q15916 424 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 PTGISQ16647 500 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 ZC3H12AQ5D1E8 599 aaKnown RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 FAM71DQ8N9W8 422 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 MDM1Q8TC05 714 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 P3H4Q92791 437 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 WNT8BQ93098 351 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 TSPYL2Q9H2G4 693 aaPredicted RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 TLL2Q9Y6L7 1015 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 PAPSS1O43252 624 aaPredicted RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 THP07101 528 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 IGFBP6P24592 240 aaPredicted RBP14.3□□□□□ -0.12
CLK3-203ENST00000454830 POLNQ7Z5Q5 900 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 UNC93AQ86WB7 457 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 MGARPQ8TDB4 240 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 FNIP1Q8TF40 1166 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 KCNK9Q9NPC2 374 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 CALCOCO1Q9P1Z2 691 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 NME7Q9Y5B8 376 aa14.3□□□□□ -0.12
CLK3-203ENST00000454830 SEPT4O43236 478 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 KPNA6O60684 536 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 IVLP07476 585 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 PFKMP08237 780 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 SEC24CP53992 1094 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 PPP2R2AP63151 447 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 IFRD2Q12894 506 aaPredicted RBP14.29□□□□□ -0.12
CLK3-203ENST00000454830 MDH1BQ5I0G3 518 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 ADAM33Q9BZ11 813 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 NEU2Q9Y3R4 380 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 C2CD4BA6NLJ0 364 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 PIRO00625 290 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 TRPA1O75762 1119 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 STAU1O95793 577 aaKnown RBP14.29□□□□□ -0.12
CLK3-203ENST00000454830 CYBAP13498 195 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 NRLP54845 237 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 IFI35P80217 286 aaPredicted RBP14.29□□□□□ -0.12
CLK3-203ENST00000454830 CAV1Q03135 178 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 KDM7AQ6ZMT4 941 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 SIX6OS1Q8N1H7 587 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 TTC13Q8NBP0 860 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 DYDC1Q8WWB3 177 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 PEBP4Q96S96 227 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 TSPYL1Q9H0U9 437 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
CLK3-203ENST00000454830 CCDC77Q9BR77 488 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 RSAD1Q9HA92 442 aa14.29□□□□□ -0.12
CLK3-203ENST00000454830 DDX43Q9NXZ2 648 aaKnown RBP14.29□□□□□ -0.12
CLK3-203ENST00000454830 TMEM88BA6NKF7 163 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 ANKRD65E5RJM6 399 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 POC1B-GALNT4F8VUJ3 575 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 CAPN9O14815 690 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 EIF3HO15372 352 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLK3-203ENST00000454830 PECAM1P16284 738 aaPredicted RBP14.28□□□□□ -0.12
CLK3-203ENST00000454830 GJA9P57773 515 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 ADIGQ0VDE8 80 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 C6orf118Q5T5N4 469 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 TRMT10CQ7L0Y3 403 aaKnown RBP14.28□□□□□ -0.12
CLK3-203ENST00000454830 ANKMY2Q8IV38 441 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 ANKRD52Q8NB46 1076 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 CCHCR1Q8TD31 782 aa14.28□□□□□ -0.12
CLK3-203ENST00000454830 SENP8Q96LD8 212 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms