RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TMEM30AQ9NV96 361 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 KBTBD4Q9NVX7 518 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 EBF1Q9UH73 591 aa12.45□□□□□ -0.42
GARNL3-210ENST00000453030 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-210ENST00000453030 MORC2Q9Y6X9 1032 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-210ENST00000453030 BCLAF3A2AJT9 711 aaKnown RBP12.44□□□□□ -0.42
GARNL3-210ENST00000453030 ZNF840PA6NDX5 716 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 K7EQS6 105 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 CLDN5O00501 218 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 TM4SF5O14894 197 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 SPTLC2O15270 562 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 TGFB1I1O43294 461 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 STX6O43752 255 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 CAVIN2O95810 425 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 CST3P01034 146 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-210ENST00000453030 BCKDHBP21953 392 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 CASP1P29466 404 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 PMLP29590 882 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 GNL1P36915 607 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-210ENST00000453030 NOP14P78316 857 aaKnown RBP12.44□□□□□ -0.42
GARNL3-210ENST00000453030 KDSRQ06136 332 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 CYP24A1Q07973 514 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 MESP2Q0VG99 397 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 TAF10Q12962 218 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 WDR72Q3MJ13 1102 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 PMS2CLQ68D20 193 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-210ENST00000453030 LINC00301Q8NCQ3 95 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 MDGA1Q8NFP4 955 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 ELOVL4Q9GZR5 314 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 RNF38Q9H0F5 515 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 ZSCAN16Q9H4T2 348 aaPredicted RBP12.44□□□□□ -0.42
GARNL3-210ENST00000453030 KIAA1586Q9HCI6 787 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 EHD2Q9NZN4 543 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 CFAP97Q9P2B7 532 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 NXF1Q9UBU9 619 aaKnown RBP12.44□□□□□ -0.42
GARNL3-210ENST00000453030 MMP17Q9ULZ9 603 aa12.44□□□□□ -0.42
GARNL3-210ENST00000453030 UBE4BO95155 1302 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 CACNA1EQ15878 2313 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 LNP1A1A4G5 178 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 A8MXQ7 604 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 TACC1O75410 805 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 KCNK5O95279 499 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 OLFM2O95897 454 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 OAS1P00973 400 aaKnown RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 MBL2P11226 248 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 PFKLP17858 780 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 PTPN1P18031 435 aaKnown RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 TIE1P35590 1138 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 SLC7A9P82251 487 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 TRPC3Q13507 836 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 PSMD6Q15008 389 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 DHCR24Q15392 516 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 USP39Q53GS9 565 aaKnown RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 TDRD10Q5VZ19 366 aaKnown RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 SCARA5Q6ZMJ2 495 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 CYP2U1Q7Z449 544 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 C12orf40Q86WS4 652 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 ALLCQ8N6M5 410 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 XXYLT1Q8NBI6 393 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 B3GALNT2Q8NCR0 500 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 CCDC26Q8TAB7 109 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 INTS4Q96HW7 963 aaKnown RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 CNOT6LQ96LI5 555 aaKnown RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 C8orf48Q96LL4 319 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 CEP295NLQ96MC4 621 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 SLITRK1Q96PX8 696 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 LSM14BQ9BX40 385 aaKnown RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 LRRC27Q9C0I9 530 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 CUEDC2Q9H467 287 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 SMYD3Q9H7B4 428 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 ZDHHC4Q9NPG8 344 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 TFIP11Q9UBB9 837 aaKnown RBP12.43□□□□□ -0.42
GARNL3-210ENST00000453030 AKAP13Q12802 2813 aa12.43□□□□□ -0.42
GARNL3-210ENST00000453030 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 PATE3B3GLJ2 98 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 SLC9A3R1O14745 358 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 KLF8O95600 359 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 ADH1CP00326 375 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 ADH5P11766 374 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 HNRNPLP14866 589 aaKnown RBP eCLIP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 SLC6A11P48066 632 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 PPP3CCP48454 512 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 DHPSP49366 369 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 CASP4P49662 377 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 NOVA1P51513 510 aaKnown RBP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 MYL6P60660 151 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 AMPD3Q01432 767 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 CRY1Q16526 586 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 FOXD4L6Q3SYB3 417 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 TMEM92Q6UXU6 159 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 FOXD4L3Q6VB84 417 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 ARMCX6Q7L4S7 300 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 RASSF3Q86WH2 238 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 TXNDC5Q8NBS9 432 aaKnown RBP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 ZNF507Q8TCN5 953 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 SCFD1Q8WVM8 642 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms