RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 AGBL2Q5U5Z8 902 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 ZNF598Q86UK7 904 aaKnown RBP11.27□□□□□ -0.6
PKP4-206ENST00000452162 CCDC50Q8IVM0 306 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 HEMGNQ9BXL5 484 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 RNF19AQ9NV58 838 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 TMEM161AQ9NX61 479 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 WHRNQ9P202 907 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 MTRF1LQ9UGC7 380 aaKnown RBP11.27□□□□□ -0.6
PKP4-206ENST00000452162 ITGA11Q9UKX5 1188 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 EYSQ5T1H1 3165 aa11.27□□□□□ -0.6
PKP4-206ENST00000452162 KIAA1671Q9BY89 1806 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 F8VP50 259 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 GJC1P36383 396 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 SSR1P43307 286 aaKnown RBP11.27□□□□□ -0.61
PKP4-206ENST00000452162 CCNG2Q16589 344 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 DCUN1D2Q6PH85 259 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 NT5DC4Q86YG4 428 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 RCOR2Q8IZ40 523 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.61
PKP4-206ENST00000452162 ZNF689Q96CS4 500 aaPredicted RBP11.27□□□□□ -0.61
PKP4-206ENST00000452162 HPDLQ96IR7 371 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 ACAP3Q96P50 834 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 ADPGKQ9BRR6 497 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 TTYH1Q9H313 450 aaPredicted RBP11.27□□□□□ -0.61
PKP4-206ENST00000452162 ELAC1Q9H777 363 aaKnown RBP11.27□□□□□ -0.61
PKP4-206ENST00000452162 LRRC4CQ9HCJ2 640 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 HOMER3Q9NSC5 361 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 TJP2Q9UDY2 1190 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 NEU2Q9Y3R4 380 aa11.27□□□□□ -0.61
PKP4-206ENST00000452162 ZNF623O75123 536 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 NPTXRO95502 500 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 IVDP26440 423 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 EIF3BP55884 814 aaKnown RBP11.26□□□□□ -0.61
PKP4-206ENST00000452162 GNGT1P63211 74 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 INCA1Q0VD86 236 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 ORC1Q13415 861 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 PIGHQ14442 188 aaPredicted RBP11.26□□□□□ -0.61
PKP4-206ENST00000452162 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 ATP13A4Q4VNC1 1196 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 PAN2Q504Q3 1202 aaKnown RBP11.26□□□□□ -0.61
PKP4-206ENST00000452162 RHBDF2Q6PJF5 856 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 Q7L0L9 218 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 SMG8Q8ND04 991 aaKnown RBP11.26□□□□□ -0.61
PKP4-206ENST00000452162 GRK7Q8WTQ7 553 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 TMEM176AQ96HP8 235 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 RBM41Q96IZ5 413 aaKnown RBP11.26□□□□□ -0.61
PKP4-206ENST00000452162 SLITRK1Q96PX8 696 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 KLHL11Q9NVR0 708 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 DPP3Q9NY33 737 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 AGAP1Q9UPQ3 857 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 HES2Q9Y543 173 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 MYO7AQ13402 2215 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 CITO14578 2027 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 SIGLEC16A6NMB1 481 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 A6NNZ2 444 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 EIF3HO15372 352 aaKnown RBP eCLIP11.26□□□□□ -0.61
PKP4-206ENST00000452162 EOMESO95936 686 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 P4HA1P13674 534 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 PTPN7P35236 360 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 ATP1A2P50993 1020 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 RBP5P82980 135 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 TUBB8Q3ZCM7 444 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 CLLU1OSQ5K130 101 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 SLC27A1Q6PCB7 646 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 ATL2Q8NHH9 583 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 SP7Q8TDD2 431 aaPredicted RBP11.26□□□□□ -0.61
PKP4-206ENST00000452162 FAM161BQ96MY7 647 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 CPXM1Q96SM3 734 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 FAM124BQ9H5Z6 455 aaPredicted RBP11.26□□□□□ -0.61
PKP4-206ENST00000452162 SLC28A3Q9HAS3 691 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 CALCOCO1Q9P1Z2 691 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.26□□□□□ -0.61
PKP4-206ENST00000452162 IPPQ9Y573 584 aa11.26□□□□□ -0.61
PKP4-206ENST00000452162 TDRD15B5MCY1 1934 aaKnown RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 PI4K2BG5E9Z4 385 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 MICAL2O94851 1124 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 GAS8O95995 478 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 KRT1P04264 644 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 SHBGP04278 402 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 IVLP07476 585 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 RAB27AP51159 221 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 COPS2P61201 443 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 ADCY2Q08462 1091 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 SLMAPQ14BN4 828 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 UBAP2Q5T6F2 1119 aaKnown RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 TXNRD3NBQ6F5E7 133 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 MFSD7Q6UXD7 560 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 AGMOQ6ZNB7 445 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 JOSD2Q8TAC2 188 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 SNF8Q96H20 258 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 SEMA4AQ9H3S1 761 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 NXF3Q9H4D5 531 aaKnown RBP11.25□□□□□ -0.61
PKP4-206ENST00000452162 ZNF576Q9H609 170 aa11.25□□□□□ -0.61
PKP4-206ENST00000452162 CERS4Q9HA82 394 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms