RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 RNF38Q9H0F5 515 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 VRTNQ9H8Y1 702 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 USP25Q9UHP3 1055 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 WNT6Q9Y6F9 365 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 ATG2BQ96BY7 2078 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 AXIN1O15169 862 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 PAPSS2O95340 614 aaPredicted RBP17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 NR3C1P04150 777 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 ANXA13P27216 316 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 GJA4P35212 333 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 SYKP43405 635 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 SHC2P98077 582 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 NCOA4Q13772 614 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 PDGFRLQ15198 375 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 C1orf220Q5T0J3 134 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 PAQR9Q6ZVX9 377 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 SYNPOQ8N3V7 929 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 FAM160A2Q8N612 972 aaPredicted RBP17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 B3GALNT2Q8NCR0 500 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 OSCP1Q8WVF1 389 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 CEP295NLQ96MC4 621 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 GOLPH3LQ9H4A5 285 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 ECT2Q9H8V3 914 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 POLR3BQ9NW08 1133 aaPredicted RBP17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 DUS2Q9NX74 493 aaKnown RBP17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 TRPM5Q9NZQ8 1165 aa17.49■□□□□ 0.39
RPUSD3-209ENST00000451405 ZNF840PA6NDX5 716 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 TRIM66O15016 1216 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 EGFP01133 1207 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 MYL1P05976 194 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 AP3M2P53677 418 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 NOP14P78316 857 aaKnown RBP17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 DPYDQ12882 1025 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 USP4Q13107 963 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 ZNF699Q32M78 642 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 EML3Q32P44 896 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 EZH1Q92800 747 aaPredicted RBP17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 KCNK16Q96T55 309 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 ARHGAP26Q9UNA1 814 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 MAPK8IP1Q9UQF2 711 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 BAHCC1Q9P281 2608 aa17.48■□□□□ 0.39
RPUSD3-209ENST00000451405 RHOBTB3O94955 611 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 PROS1P07225 676 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 TCF3P15923 654 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 LIMK1P53667 647 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 GRSF1Q12849 480 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 TAF10Q12962 218 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 KCNB1Q14721 858 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 SF3A2Q15428 464 aaKnown RBP17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 ZACNQ401N2 412 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 ZNF667Q5HYK9 610 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 KRBA2Q6ZNG9 492 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 SV2AQ7L0J3 742 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 ARRDC1-AS1Q9H2J1 176 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 TRAF3IP3Q9Y228 551 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 ATRXP46100 2492 aa17.47■□□□□ 0.39
RPUSD3-209ENST00000451405 LEFTY2O00292 366 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 ABL1P00519 1130 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 IFNAR2P48551 515 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 IFRD2Q12894 506 aaPredicted RBP17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 ORC1Q13415 861 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 CCDC6Q16204 474 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 SGSM1Q2NKQ1 1148 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 SPOPLQ6IQ16 392 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 TMC2Q8TDI7 906 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 P2RY13Q9BPV8 354 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 ELOVL4Q9GZR5 314 aa17.46■□□□□ 0.39
RPUSD3-209ENST00000451405 HELZP42694 1942 aaKnown RBP17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 A0A1W2PQ27 194 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 A0A1W2PQ64 194 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 A0A1W2PQD8 194 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 ANTXRLA6NF34 631 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 CALUO43852 315 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 RNF40O75150 1001 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 ZNF202O95125 648 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 OLFM2O95897 454 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 PXNP49023 591 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 SLC7A9P82251 487 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 AMPD2Q01433 879 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 STPG1Q5TH74 334 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 ACOT1Q86TX2 421 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 FAM35AQ86V20 835 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 NUP93Q8N1F7 819 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 CPA6Q8N4T0 437 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 SCAMP5Q8TAC9 235 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 ATP2A3Q93084 1043 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 HMGXB4Q9UGU5 601 aa17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 CHORDC1Q9UHD1 332 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-209ENST00000451405 TNFRSF10BO14763 440 aa17.44■□□□□ 0.38
RPUSD3-209ENST00000451405 SCAMP3O14828 347 aaKnown RBP17.44■□□□□ 0.38
RPUSD3-209ENST00000451405 IKBKBO14920 756 aa17.44■□□□□ 0.38
RPUSD3-209ENST00000451405 AKAP3O75969 853 aa17.44■□□□□ 0.38
RPUSD3-209ENST00000451405 CLSTN1O94985 981 aa17.44■□□□□ 0.38
RPUSD3-209ENST00000451405 OAS1P00973 400 aaKnown RBP17.44■□□□□ 0.38
RPUSD3-209ENST00000451405 HLA-DRAP01903 254 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms