RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 NCAM2O15394 837 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 TADA3O75528 432 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 STAU1O95793 577 aaKnown RBP18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 WEE1P30291 646 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 AVPR1AP37288 418 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 MAGEA11P43364 429 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 UBASH3AP57075 661 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 CLDN10P78369 228 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 TNK2Q07912 1038 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 MAPRE1Q15691 268 aaKnown RBP18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 ARHGAP29Q52LW3 1261 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 ZNF667Q5HYK9 610 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 ZSCAN30Q86W11 494 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 CELF5Q8N6W0 485 aaKnown RBP18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 TTC16Q8NEE8 873 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 SLC35C1Q96A29 364 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 CYP2S1Q96SQ9 504 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 NDST4Q9H3R1 872 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 LMAN1LQ9HAT1 526 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 TRPC7Q9HCX4 862 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.11■□□□□ 0.494e-7■■■■■ 80.1
PRPF40A-204ENST00000450303 GKN1Q9NS71 199 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 OBP2AQ9NY56 170 aa18.11■□□□□ 0.49
PRPF40A-204ENST00000450303 PRR23AA6NEV1 266 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 CLDN5O00501 218 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 P4HA2O15460 535 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 LAMTOR5O43504 91 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 FAM163BP0C2L3 166 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 TRIM49P0CI25 452 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 TRIM49CP0CI26 452 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 CSTF1Q05048 431 aaKnown RBP18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 C1orf220Q5T0J3 134 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 KRT39Q6A163 491 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 SARM1Q6SZW1 724 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 MON1AQ86VX9 555 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 ZNF687Q8N1G0 1237 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 NKD2Q969F2 451 aaPredicted RBP18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 TRMT2BQ96GJ1 504 aaKnown RBP18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 MYRFLQ96LU7 910 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 SDCBP2Q9H190 292 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 MMRN2Q9H8L6 949 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 TMEM8AQ9HCN3 771 aa18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 RTN4Q9NQC3 1192 aaKnown RBP18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 UXTQ9UBK9 157 aaPredicted RBP18.1■□□□□ 0.49
PRPF40A-204ENST00000450303 DDX6P26196 483 aaKnown RBP eCLIP18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 ANXA13P27216 316 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 FMO5P49326 533 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 MXI1P50539 228 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 CACNA2D1P54289 1103 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 USP46P62068 366 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 ZACNQ401N2 412 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 SPOPLQ6IQ16 392 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 TXNDC11Q6PKC3 985 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 TSSK4Q6SA08 328 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 VSTM1Q6UX27 236 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 SV2AQ7L0J3 742 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 RIN3Q8TB24 985 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 SLC22A12Q96S37 553 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 B3GNT5Q9BYG0 378 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 TRIM5Q9C035 493 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 ZNF518BQ9C0D4 1074 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 TDP1Q9NUW8 608 aa18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 THG1LQ9NWX6 298 aaKnown RBP18.09■□□□□ 0.49
PRPF40A-204ENST00000450303 A0A1B0GTH6 734 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 C2orf78A6NCI8 922 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 LGALS16A8MUM7 142 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 GOLGA6L6A8MZA4 724 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 F8VP50 259 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 SPECC1L-ADORA2AF8WAN1 911 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 PMM2O15305 246 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 MAGEA9P43362 315 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 RPS9P46781 194 aaKnown RBP18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 GCLMP48507 274 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 UBXN1Q04323 297 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 MTAPQ13126 283 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 ORC1Q13415 861 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 MIIPQ5JXC2 388 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 TRIM68Q6AZZ1 485 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 ARL14EPQ8N8R7 260 aaPredicted RBP18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 B3GALNT2Q8NCR0 500 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 CCDC150Q8NCX0 1101 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 SPATA17Q96L03 361 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 C8orf33Q9H7E9 229 aaPredicted RBP18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 VRTNQ9H8Y1 702 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 RBM12Q9NTZ6 932 aaKnown RBP18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 TMEM30AQ9NV96 361 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 IFNKQ9P0W0 207 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 ZMYM5Q9UJ78 669 aa18.08■□□□□ 0.48
PRPF40A-204ENST00000450303 FANCMQ8IYD8 2048 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 GTPBP10A4D1E9 387 aaKnown RBP18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 TRIM66O15016 1216 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 HLA-DRAP01903 254 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 CHRNB1P11230 501 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 CLCN1P35523 988 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 PPP3CAQ08209 521 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 IFRD2Q12894 506 aaPredicted RBP18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 PON2Q15165 354 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 SGSM1Q2NKQ1 1148 aa18.07■□□□□ 0.48
PRPF40A-204ENST00000450303 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms