RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 EPHX3Q9H6B9 360 aa13.81□□□□□ -0.2
SNRNP27-203ENST00000450162 KIF9Q9HAQ2 790 aa13.81□□□□□ -0.2
SNRNP27-203ENST00000450162 PLCB1Q9NQ66 1216 aa13.81□□□□□ -0.2
SNRNP27-203ENST00000450162 WNT16Q9UBV4 365 aa13.81□□□□□ -0.2
SNRNP27-203ENST00000450162 FARP1Q9Y4F1 1045 aaPredicted RBP13.81□□□□□ -0.2
SNRNP27-203ENST00000450162 MYO10Q9HD67 2058 aa13.81□□□□□ -0.2
SNRNP27-203ENST00000450162 PTPRDP23468 1912 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 ZNF840PA6NDX5 716 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 O00370 1275 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 MED7O43513 233 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 BEST1O76090 585 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 USP17L7P0C7H9 530 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 SETSIPP0DME0 302 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 FCARP24071 287 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 PSEN1P49768 467 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TUBP50607 506 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 COPB1P53618 953 aaKnown RBP13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 USP46P62068 366 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TPM4P67936 248 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 CYP4F8P98187 520 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 BST2Q10589 180 aaKnown RBP13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TAF10Q12962 218 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 BMP8AQ7Z5Y6 402 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 MAB21L3Q8N8X9 362 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 SHC3Q92529 594 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 KAT5Q92993 513 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 FBXO32Q969P5 355 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TRMT61BQ9BVS5 477 aaKnown RBP13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 VPS16Q9H269 839 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TRPV5Q9NQA5 729 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TDP1Q9NUW8 608 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 THG1LQ9NWX6 298 aaKnown RBP13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TAB2Q9NYJ8 693 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 TSPAN16Q9UKR8 245 aa13.8□□□□□ -0.2
SNRNP27-203ENST00000450162 MUC3AQ02505 3323 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 PRR33A8MZF0 331 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 HHLA1C9JL84 531 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 NRG2O14511 850 aaPredicted RBP13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 XPO1O14980 1071 aaKnown RBP13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 TADA3O75528 432 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 KRT5P13647 590 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 HDCP19113 662 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 KIF11P52732 1056 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 BPIFB4P59827 614 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 KCNMA1Q12791 1236 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 ZSCAN23Q3MJ62 389 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 TMEM31Q5JXX7 168 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 STXBP5Q5T5C0 1151 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 KLHDC7AQ5VTJ3 777 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 TXNDC8Q6A555 127 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 DHX40Q8IX18 779 aaKnown RBP13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 SCAMP5Q8TAC9 235 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 IRF7Q92985 503 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 KXD1Q9BQD3 176 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 RPP25Q9BUL9 199 aaKnown RBP13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 SIX2Q9NPC8 291 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 TLR8Q9NR97 1041 aaKnown RBP13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 DNAJC12Q9UKB3 198 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 USP3Q9Y6I4 520 aa13.79□□□□□ -0.2
SNRNP27-203ENST00000450162 LGALS16A8MUM7 142 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 HEPACAM2A8MVW5 462 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 RNF225M0QZC1 329 aaPredicted RBP13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 CHADO15335 359 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 ZDHHC11BP0C7U3 371 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 UCHL3P15374 230 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 TCF3P15923 654 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 VIPR2P41587 438 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 PLA2G4AP47712 749 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 MLLT6P55198 1093 aaPredicted RBP13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 GPC5P78333 572 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 PTK2Q05397 1052 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 FCHO2Q0JRZ9 810 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 IQCB1Q15051 598 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 NFKBIBQ15653 356 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 GOLGA7BQ2TAP0 167 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 FILIP1LQ4L180 1135 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 PKDCCQ504Y2 493 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 ARHGAP29Q52LW3 1261 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 RAB41Q5JT25 222 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 CCDC186Q7Z3E2 898 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 TTC30AQ86WT1 665 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 YAF2Q8IY57 180 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 ARHGAP18Q8N392 663 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 ZNF276Q8N554 614 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 KCTD13Q8WZ19 329 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 DNASE1L2Q92874 299 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 SHDQ96IW2 340 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 HSFY1Q96LI6 401 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 CDK5RAP1Q96SZ6 601 aaKnown RBP13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 STK33Q9BYT3 514 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 HSD3B7Q9H2F3 369 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 FBXL21Q9UKT6 434 aa13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNRNP27-203ENST00000450162 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
SNRNP27-203ENST00000450162 M0R296 226 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms