RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 CSNK1G1Q9HCP0 422 aa11.25□□□□□ -0.61
SMPD4-211ENST00000449159 KIAA1257Q9ULG3 409 aa11.25□□□□□ -0.61
SMPD4-211ENST00000449159 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMPD4-211ENST00000449159 ZDBF2Q9HCK1 2354 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 C2CD4DB7Z1M9 353 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 M0QYV0 167 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 THAP12O43422 761 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 TADA3O75528 432 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 GFPT2O94808 682 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 MICAL2O94851 1124 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 CSH1P0DML2 217 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 CSH2P0DML3 217 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 GABRR2P28476 465 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 SLC5A3P53794 718 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 CYP4F8P98187 520 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 PDE4CQ08493 712 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 TAF12Q16514 161 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 PKDCCQ504Y2 493 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 CYP4A22Q5TCH4 519 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 LCLAT1Q6UWP7 414 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 NPAS3Q8IXF0 933 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 ANKRD52Q8NB46 1076 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 ST13P5Q8NFI4 369 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-211ENST00000449159 BAP1Q92560 729 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 EDAQ92838 391 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 FGF13Q92913 245 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 TRMT2BQ96GJ1 504 aaKnown RBP11.24□□□□□ -0.61
SMPD4-211ENST00000449159 TTLL2Q9BWV7 592 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 TTYH3Q9C0H2 523 aa11.24□□□□□ -0.61
SMPD4-211ENST00000449159 AVENQ9NQS1 362 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-211ENST00000449159 MRPS23Q9Y3D9 190 aaKnown RBP11.24□□□□□ -0.61
SMPD4-211ENST00000449159 VPS13AQ96RL7 3174 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 FAM170AA1A519 330 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-211ENST00000449159 SOX5P35711 763 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 BCAT1P54687 386 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 PTPN5P54829 565 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 BST2Q10589 180 aaKnown RBP11.23□□□□□ -0.61
SMPD4-211ENST00000449159 TEAD2Q15562 447 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 CNGA2Q16280 664 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 TAF3Q5VWG9 929 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 DENND1BQ6P3S1 775 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 NOP9Q86U38 636 aaKnown RBP11.23□□□□□ -0.61
SMPD4-211ENST00000449159 PIGZQ86VD9 579 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 SUGP1Q8IWZ8 645 aaKnown RBP11.23□□□□□ -0.61
SMPD4-211ENST00000449159 NUP93Q8N1F7 819 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 SLC20A1Q8WUM9 679 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 ZNF606Q8WXB4 792 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 SECISBP2LQ93073 1101 aaKnown RBP11.23□□□□□ -0.61
SMPD4-211ENST00000449159 MYRFLQ96LU7 910 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 CEP295NLQ96MC4 621 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 ZSWIM3Q96MP5 696 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 SPAG5Q96R06 1193 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 HESX1Q9UBX0 185 aa11.23□□□□□ -0.61
SMPD4-211ENST00000449159 TMEM221A6NGB7 291 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 LOC730098B7Z3J9 87 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 M0R296 226 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 PIK3R2O00459 728 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 XPO1O14980 1071 aaKnown RBP11.22□□□□□ -0.61
SMPD4-211ENST00000449159 GABBR2O75899 941 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 F11P03951 625 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 CYP11B1P15538 503 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 YWHAQP27348 245 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 PGFP49763 221 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 RGS7P49802 495 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 KIF11P52732 1056 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 ARID5AQ03989 594 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 PTK2Q05397 1052 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 TAF10Q12962 218 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 STILQ15468 1287 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 E4F1Q66K89 784 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-211ENST00000449159 PMF1Q6P1K2 205 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 BMP8AQ7Z5Y6 402 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 PASD1Q8IV76 773 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 TDRD5Q8NAT2 981 aaKnown RBP11.22□□□□□ -0.61
SMPD4-211ENST00000449159 LEMD2Q8NC56 503 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 PRSS33Q8NF86 280 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 EPS8L1Q8TE68 723 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 DDX1Q92499 740 aaKnown RBP11.22□□□□□ -0.61
SMPD4-211ENST00000449159 MCRS1Q96EZ8 462 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 PRRX2Q99811 253 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 ATXN3LQ9H3M9 355 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 PNPLA8Q9NP80 782 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMPD4-211ENST00000449159 IL37Q9NZH6 218 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 CYTH4Q9UIA0 394 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 CDH7Q9ULB5 785 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 USTQ9Y2C2 406 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 NR2E1Q9Y466 385 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 DAAM1Q9Y4D1 1078 aa11.22□□□□□ -0.61
SMPD4-211ENST00000449159 FAM92AA1XBS5 289 aa11.21□□□□□ -0.61
SMPD4-211ENST00000449159 LRRC53A6NM62 1247 aa11.21□□□□□ -0.61
SMPD4-211ENST00000449159 ZNF197O14709 1029 aa11.21□□□□□ -0.61
SMPD4-211ENST00000449159 CBFA2T2O43439 604 aa11.21□□□□□ -0.61
SMPD4-211ENST00000449159 MED7O43513 233 aa11.21□□□□□ -0.61
SMPD4-211ENST00000449159 RTN3O95197 1032 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-211ENST00000449159 GYPCP04921 128 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms