RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 POF1BQ8WVV4 589 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 CLP1Q92989 425 aaKnown RBP9.09□□□□□ -0.95
TTC39A-212ENST00000447632 TMEM209Q96SK2 561 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 CD248Q9HCU0 757 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 GGA2Q9UJY4 613 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 NOVA2Q9UNW9 492 aaKnown RBP9.09□□□□□ -0.95
TTC39A-212ENST00000447632 BZW2Q9Y6E2 419 aaKnown RBP9.09□□□□□ -0.95
TTC39A-212ENST00000447632 PER2O15055 1255 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 RASSF9O75901 435 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 KRT5P13647 590 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 GSCP56915 257 aaPredicted RBP9.09□□□□□ -0.95
TTC39A-212ENST00000447632 JAM2P57087 298 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 PSMC1P62191 440 aaKnown RBP9.09□□□□□ -0.95
TTC39A-212ENST00000447632 GPM6BQ13491 265 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 SV2CQ496J9 727 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
TTC39A-212ENST00000447632 RAPGEF5Q92565 580 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 ZNF560Q96MR9 790 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 KREMEN1Q96MU8 473 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 TMEM175Q9BSA9 504 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 DPH5Q9H2P9 285 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 ZNF576Q9H609 170 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 OSGEPQ9NPF4 335 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 HMGXB4Q9UGU5 601 aa9.09□□□□□ -0.95
TTC39A-212ENST00000447632 CCDC188H7C350 402 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 FOXN3O00409 490 aaPredicted RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 CXCL14O95715 111 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 H2AFZP0C0S5 128 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 GNL1P36915 607 aaPredicted RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 ASPAP45381 313 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 MAGOHP61326 146 aaKnown RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 PPP2R2AP63151 447 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 DHX9Q08211 1270 aaKnown RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 RAB30Q15771 203 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 IFI16Q16666 785 aaKnown RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 ODF2Q5BJF6 829 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 PLPP4Q5VZY2 271 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 TMEM270Q6UE05 265 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 RSPO2Q6UXX9 243 aaPredicted RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 H2AFVQ71UI9 128 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 Q7L0L9 218 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 DAAM2Q86T65 1068 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 LRRC52Q8N7C0 313 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 C12orf29Q8N999 325 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 FBXO22Q8NEZ5 403 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 SPPL3Q8TCT6 385 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 SEC14L1Q92503 715 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 MAGOHBQ96A72 148 aaKnown RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 HES6Q96HZ4 224 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 UROC1Q96N76 676 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 PGLYRP2Q96PD5 576 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 DPEP3Q9H4B8 488 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 PRDM12Q9H4Q4 367 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 HIDE1A8MVS5 230 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 A8MXQ7 604 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 F8VZ95 297 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 ADAM12O43184 909 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 PNPLA4P41247 253 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 GALCP54803 685 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 CUL2Q13617 745 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 VARS2Q5ST30 1063 aaKnown RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 AGBL2Q5U5Z8 902 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 OVOS1Q6IE37 1185 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 ACOT1Q86TX2 421 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 OSTM1Q86WC4 334 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 PALB2Q86YC2 1186 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 ADGRF2Q8IZF7 708 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 LNX1Q8TBB1 728 aaPredicted RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 TCF25Q9BQ70 676 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 TRIM51Q9BSJ1 452 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 TTPALQ9BTX7 342 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 TRIM31Q9BZY9 425 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 NIF3L1Q9GZT8 377 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 SLC40A1Q9NP59 571 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 CISHQ9NSE2 258 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 KLC4Q9NSK0 619 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 DDX43Q9NXZ2 648 aaKnown RBP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 APEX2Q9UBZ4 518 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 GTF3C4Q9UKN8 822 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 SH3BP1Q9Y3L3 701 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 NME7Q9Y5B8 376 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 PCDHB4Q9Y5E5 795 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 REV3LO60673 3130 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 CITO14578 2027 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 SF3B1O75533 1304 aaKnown RBP eCLIP9.08□□□□□ -0.96
TTC39A-212ENST00000447632 SCN1AP35498 2009 aa9.08□□□□□ -0.96
TTC39A-212ENST00000447632 P4HA2O15460 535 aa9.07□□□□□ -0.96
TTC39A-212ENST00000447632 BUB1BO60566 1050 aaPredicted RBP9.07□□□□□ -0.96
TTC39A-212ENST00000447632 GFPT2O94808 682 aa9.07□□□□□ -0.96
TTC39A-212ENST00000447632 FGGP02679 453 aa9.07□□□□□ -0.96
TTC39A-212ENST00000447632 IGFBP4P22692 258 aa9.07□□□□□ -0.96
TTC39A-212ENST00000447632 ATICP31939 592 aa9.07□□□□□ -0.96
TTC39A-212ENST00000447632 NDST1P52848 882 aa9.07□□□□□ -0.96
TTC39A-212ENST00000447632 MCCD1P59942 119 aaPredicted RBP9.07□□□□□ -0.96
TTC39A-212ENST00000447632 YWHAHQ04917 246 aaPredicted RBP9.07□□□□□ -0.96
TTC39A-212ENST00000447632 CAMK1Q14012 370 aa9.07□□□□□ -0.96
TTC39A-212ENST00000447632 DRAP1Q14919 205 aaPredicted RBP9.07□□□□□ -0.96
TTC39A-212ENST00000447632 GRIN2CQ14957 1233 aa9.07□□□□□ -0.96
TTC39A-212ENST00000447632 USP41Q3LFD5 358 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms