RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 PPP1R13BQ96KQ4 1090 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 SPATA17Q96L03 361 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 ZNF830Q96NB3 372 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 MTMR10Q9NXD2 777 aa18.97■□□□□ 0.63
TRAPPC4-203ENST00000447216 E5RJQ4 531 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 ERBB2P04626 1255 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 NSFP46459 744 aaKnown RBP18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 USP46P62068 366 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 CCZ1BP86790 482 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 CCZ1P86791 482 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 CENPCQ03188 943 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 ADIGQ0VDE8 80 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 PLD1Q13393 1074 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 ADAM15Q13444 863 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 CCDC85BQ15834 202 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 SLC18A3Q16572 532 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 CCDC122Q5T0U0 273 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 CYP4A22Q5TCH4 519 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 MMS22LQ6ZRQ5 1243 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 EP400NLQ6ZTU2 488 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 PHLDB2Q86SQ0 1253 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 ERICH1Q86X53 443 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 NUP93Q8N1F7 819 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 STK32AQ8WU08 396 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 NDRG1Q92597 394 aaKnown RBP18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 NOX5Q96PH1 765 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 C11orf70Q9BRQ4 267 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 APOL5Q9BWW9 433 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 SLC4A5Q9BY07 1137 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 UBXN6Q9BZV1 441 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 LRRC4Q9HBW1 653 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 NAGPAQ9UK23 515 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 NENFQ9UMX5 172 aa18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 MAGED2Q9UNF1 606 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC4-203ENST00000447216 ZNF263O14978 683 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 FOSL2P15408 326 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 CYLC1P35663 651 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 TKTL1P51854 596 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 VEPH1Q14D04 833 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 RAB41Q5JT25 222 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 RARS2Q5T160 578 aaKnown RBP18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 ALKBH5Q6P6C2 394 aaKnown RBP18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 DENND5BQ6ZUT9 1274 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 CCDC170Q8IYT3 715 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 CLEC4CQ8WTT0 213 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 KCTD13Q8WZ19 329 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 HSFY1Q96LI6 401 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 ULBP1Q9BZM6 244 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 MIS12Q9H081 205 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 KCNF1Q9H3M0 494 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 SYNCQ9H7C4 482 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 PNPLA8Q9NP80 782 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 DZANK1Q9NVP4 752 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 CLDND1Q9NY35 253 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 DPP7Q9UHL4 492 aa18.95■□□□□ 0.62
TRAPPC4-203ENST00000447216 CCDC195A0A1B0GUA6 201 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 RTN2O75298 545 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 FTLP02792 175 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 GZMAP12544 262 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 HMGA1P17096 107 aaKnown RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 MMP8P22894 467 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 ACADSBP45954 432 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 RPL34P49207 117 aaKnown RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 DLX2Q07687 328 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 PTP4A2Q12974 167 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 ANKRD54Q6NXT1 300 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 ELMSAN1Q6PJG2 1045 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 TMC5Q6UXY8 1006 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 DNAJB7Q7Z6W7 309 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 TMEM110Q86TL2 294 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 PHF13Q86YI8 300 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 HS6ST3Q8IZP7 471 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 SIX6OS1Q8N1H7 587 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 CCDC112Q8NEF3 446 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 IPO4Q8TEX9 1081 aaKnown RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 PPM1EQ8WY54 764 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 ZNF707Q96C28 371 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 ZNF334Q9HCZ1 680 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 HCFC1R1Q9NWW0 138 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 ZDHHC7Q9NXF8 308 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 ADAM22Q9P0K1 906 aa18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 EPN1Q9Y6I3 576 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC4-203ENST00000447216 TBX10O75333 385 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 RTN3O95197 1032 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 NDUFA10O95299 355 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 HNRNPA1P09651 372 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 USP17L7P0C7H9 530 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 CSH1P0DML2 217 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 CSH2P0DML3 217 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 HOXA9P31269 272 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 TAF12Q16514 161 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 CTC1Q2NKJ3 1217 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 OR6B2Q6IFH4 312 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 SYCE2Q6PIF2 218 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 TMEM184AQ6ZMB5 413 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 FAM183BPQ6ZVS7 135 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 MON1BQ7L1V2 547 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 RTL10Q7L3V2 364 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 SCUBE3Q8IX30 993 aa18.93■□□□□ 0.62
TRAPPC4-203ENST00000447216 MCOLN2Q8IZK6 566 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms