RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 PLEKHO2Q8TD55 490 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 PSPC1Q8WXF1 523 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 GJA10Q969M2 543 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 ZNF689Q96CS4 500 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 RCC1LQ96I51 464 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 UIMC1Q96RL1 719 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 POLR3CQ9BUI4 534 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 LMAN2LQ9H0V9 348 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 PCDH18Q9HCL0 1135 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 DACT1Q9NYF0 836 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 SUCLA2Q9P2R7 463 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 ST3GAL5Q9UNP4 418 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 SMC3Q9UQE7 1217 aa8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 NOC2LQ9Y3T9 749 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-206ENST00000447024 ADGRA3Q8IWK6 1321 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 MROH6A6NGR9 719 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 H3BQV1 296 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 SLC26A4O43511 780 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 FSHBP01225 129 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 RPA1P27694 616 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 POLGP54098 1239 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 GUCY1B3Q02153 619 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 PTPROQ16827 1216 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 MBLAC2Q68D91 279 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 BRAPQ7Z569 592 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 SRGAP1Q7Z6B7 1085 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 RTN4RL1Q86UN2 441 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 FAM228AQ86W67 206 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 MIB1Q86YT6 1006 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 TPH2Q8IWU9 490 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 FAM26EQ8N5C1 309 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 KLHL6Q8WZ60 621 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 P2RX5Q93086 422 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 ZBTB10Q96DT7 871 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 DYDC2Q96IM9 177 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 SCLT1Q96NL6 688 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 ADAM2Q99965 735 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 TMEM161AQ9NX61 479 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 RGL1Q9NZL6 768 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 COG5Q9UP83 839 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 GINS2Q9Y248 185 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 PCDHB7Q9Y5E2 793 aa8.59□□□□□ -1.03
SMARCE1-206ENST00000447024 RALGAPA2Q2PPJ7 1873 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 A0A0U1RQF3 1178 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 A0A1W2PQH9 124 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 LCHNA4D1U4 455 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 H3BNC9 293 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 SUV39H1O43463 412 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 NCK2O43639 380 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 GJB2P29033 226 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 AXLP30530 894 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 BMPR1AP36894 532 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 RAB27AP51159 221 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 RACK1P63244 317 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 NCBP1Q09161 790 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 TFDP1Q14186 410 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 AAK1Q2M2I8 961 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 EPC2Q52LR7 807 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 XKR9Q5GH70 373 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 LARP1BQ659C4 914 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 ARL6IP4Q66PJ3 421 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 BORAQ6PGQ7 559 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 TRMT1LQ7Z2T5 733 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 STK32CQ86UX6 486 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 LRRC71Q8N4P6 559 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 IGSF22Q8N9C0 903 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 MCPH1Q8NEM0 835 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 ATXN2LQ8WWM7 1075 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 ARNTL2Q8WYA1 636 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 CCDC51Q96ER9 411 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 CCDC43Q96MW1 224 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 NFKBIZQ9BYH8 718 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 TMEM60Q9H2L4 133 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 TMX1Q9H3N1 280 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 ATP6V0A4Q9HBG4 840 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 METTL5Q9NRN9 209 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 MARCH2Q9P0N8 246 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 CLEC1BQ9P126 229 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 COL4A3BPQ9Y5P4 624 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 MTCH2Q9Y6C9 303 aa8.58□□□□□ -1.04
SMARCE1-206ENST00000447024 MYO7AQ13402 2215 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 FSD2A1L4K1 749 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 ZNF623O75123 536 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 ATP2B1P20020 1258 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 RARRES1P49788 294 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 NPEPPSP55786 919 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 CYP4A11Q02928 519 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 LAMTOR4Q0VGL1 99 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 COL9A2Q14055 689 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 BTG3Q14201 252 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 CTTNQ14247 550 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 EMC2Q15006 297 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 ZNF174Q15697 407 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 PLA2G4FQ68DD2 849 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 CD300LDQ6UXZ3 194 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 FAM124AQ86V42 546 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 CATSPER3Q86XQ3 398 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 RHPN2Q8IUC4 686 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 C4orf32Q8N8J7 132 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 C19orf47Q8N9M1 422 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms