RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 PLA1AQ53H76 456 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.51□□□□□ -1.53
LINC00440-201ENST00000446579 LY6G5CQ5SRR4 150 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 HYIQ5T013 277 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 RAP1GAP2Q684P5 730 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 CRTC1Q6UUV9 634 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 PCSK4Q6UW60 755 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 LRRTM4Q86VH4 590 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 CCDC28AQ8IWP9 274 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 SIMC1Q8NDZ2 872 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 RAPGEF4Q8WZA2 1011 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 RSC1A1Q92681 617 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 FAM167BQ9BTA0 163 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 IMPG2Q9BZV3 1241 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 PCDHAC1Q9H158 963 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 ZBTB26Q9HCK0 441 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 SAYSD1Q9NPB0 183 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 MRPS18AQ9NVS2 196 aaKnown RBP5.51□□□□□ -1.53
LINC00440-201ENST00000446579 TRPM5Q9NZQ8 1165 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 DNMT3BQ9UBC3 853 aaKnown RBP5.51□□□□□ -1.53
LINC00440-201ENST00000446579 ZMYND8Q9ULU4 1186 aaPredicted RBP5.51□□□□□ -1.53
LINC00440-201ENST00000446579 ATP11BQ9Y2G3 1177 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 CRYL1Q9Y2S2 319 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 SCINQ9Y6U3 715 aa5.51□□□□□ -1.53
LINC00440-201ENST00000446579 AQP7P3A6NL99 342 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 RAB27BO00194 218 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 LEFTY2O00292 366 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 RNASET2O00584 256 aaKnown RBP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 CENPBP07199 599 aaPredicted RBP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 SPATA31D3P0C874 917 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 CKMT1AP12532 417 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 TPH1P17752 444 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 NR4A1P22736 598 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 GCSHP23434 173 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 MST1P26927 711 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 RNASE9P60153 205 aaKnown RBP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 NSUN2Q08J23 767 aaKnown RBP eCLIP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 FOXD4Q12950 439 aaPredicted RBP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 TAF12Q16514 161 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 FAM110CQ1W6H9 321 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 ZNF750Q32MQ0 723 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 TIGD2Q4W5G0 525 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 SULT6B1Q6IMI4 303 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 RETSATQ6NUM9 610 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 Q6ZPA2 131 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 LRRC55Q6ZSA7 311 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 SPATA31D4Q6ZUB0 917 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 TMTC1Q8IUR5 882 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 SYT12Q8IV01 421 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 HERC6Q8IVU3 1022 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 CFAP52Q8N1V2 620 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 RNF169Q8NCN4 708 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 SMCR8Q8TEV9 937 aaPredicted RBP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 THAP4Q8WY91 577 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 HERVK_113Q902F9 699 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 SDCCAG3Q96C92 435 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 MYEOVQ96EZ4 313 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 PRPF18Q99633 342 aaKnown RBP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 TLR10Q9BXR5 811 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 TP63Q9H3D4 680 aaPredicted RBP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 UNC45AQ9H3U1 944 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 WASH6PQ9NQA3 447 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 PRDM8Q9NQV8 689 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 MTO1Q9Y2Z2 717 aaKnown RBP5.5□□□□□ -1.53
LINC00440-201ENST00000446579 CHST2Q9Y4C5 530 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 HS3ST4Q9Y661 456 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 CDY1Q9Y6F8 540 aa5.5□□□□□ -1.53
LINC00440-201ENST00000446579 DRGXA6NNA5 263 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 H7C4K7 107 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 PCDH17O14917 1159 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 RRP9O43818 475 aaKnown RBP5.49□□□□□ -1.53
LINC00440-201ENST00000446579 PRSS23O95084 383 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 NTSR2O95665 410 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 ATXN1LP0C7T5 689 aaKnown RBP5.49□□□□□ -1.53
LINC00440-201ENST00000446579 FCER1AP12319 257 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 TNFAIP3P21580 790 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 ATICP31939 592 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 ADD2P35612 726 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 RXRGP48443 463 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 PIGFQ07326 219 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 BOP1Q14137 746 aaKnown RBP5.49□□□□□ -1.53
LINC00440-201ENST00000446579 IQCB1Q15051 598 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 PTPAQ15257 358 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 NOMO2Q5JPE7 1267 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 FAXCQ5TGI0 409 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 KCNV1Q6PIU1 500 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 OR1N1Q8NGS0 311 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 PROKR1Q8TCW9 393 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 ASB12Q8WXK4 309 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 FAM227BQ96M60 508 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 PYM1Q9BRP8 204 aaKnown RBP5.49□□□□□ -1.53
LINC00440-201ENST00000446579 PABPC3Q9H361 631 aaKnown RBP5.49□□□□□ -1.53
LINC00440-201ENST00000446579 ZNF768Q9H5H4 540 aaKnown RBP5.49□□□□□ -1.53
LINC00440-201ENST00000446579 AKIP1Q9NQ31 210 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 HELLSQ9NRZ9 838 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 RASSF1Q9NS23 344 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 ZSCAN32Q9NX65 697 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 GGA3Q9NZ52 723 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 KIF17Q9P2E2 1029 aa5.49□□□□□ -1.53
LINC00440-201ENST00000446579 SLC13A4Q9UKG4 626 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms