RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ALLC	Q8N6M5	410 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	ABTB1	Q969K4	478 aa	Predicted RBP	13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	PIWIL1	Q96J94	861 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	FGD4	Q96M96	766 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	ICAM1	P05362	532 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	ALAD	P13716	330 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	VCP	P55072	806 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	NCKAP1L	P55160	1127 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	DEUP1	Q05D60	604 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	RASIP1	Q5U651	963 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	C4orf50	Q6ZRC1	276 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	SAMD7	Q7Z3H4	446 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	RNF148	Q8N7C7	305 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	CCDC110	Q8TBZ0	833 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	CISH	Q9NSE2	258 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	STARD13	Q9Y3M8	1113 aa		13.09	□□□□□ -0.31
DDR1-238	ENST00000446312	MYH9	P35579	1960 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	CCDC160	A6NGH7	325 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	SMAP	O00193	183 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	GSC2	O15499	205 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	KRT3	P12035	628 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	PTPN4	P29074	926 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	CDH6	P55285	790 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	ACTR2	P61160	394 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	RASA2	Q15283	850 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	VWA5B1	Q5TIE3	1220 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	PDIK1L	Q8N165	341 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	DTNBP1	Q96EV8	351 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	hCG_1818297	A0A087WSY0	165 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	P4HA2	O15460	535 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	MTA2	O94776	668 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	ZNF24	P17028	368 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	GNAZ	P19086	355 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	EIF4B	P23588	611 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	YARS	P54577	528 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	AQP5	P55064	265 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	SP2	Q02086	613 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	CENPC	Q03188	943 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	EMC2	Q15006	297 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	ZACN	Q401N2	412 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	C1orf146	Q5VVC0	180 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	OLFML1	Q6UWY5	402 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	EXD1	Q8NHP7	514 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	MORC4	Q8TE76	937 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	OPTN	Q96CV9	577 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	CYP26B1	Q9NR63	512 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	GJA3	Q9Y6H8	435 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	PDE4DIP	Q5VU43	2346 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	ATRNL1	Q5VV63	1379 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	UBE4B	O95155	1302 aa		13.08	□□□□□ -0.32
DDR1-238	ENST00000446312	MYOCOS	A0A1B0GUC4	107 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	INO80B-WBP1	J3KQ70	363 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	COPE	O14579	308 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	OPHN1	O60890	802 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	ACO1	P21399	889 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	OLIG2	Q13516	323 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	AMHR2	Q16671	573 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	TFDP3	Q5H9I0	405 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	LPCAT4	Q643R3	524 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	TRMT10B	Q6PF06	316 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	B3GNT9	Q6UX72	402 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	IZUMO2	Q6UXV1	221 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	PGBD4	Q96DM1	585 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	MFSD14A	Q96MC6	490 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	INO80B	Q9C086	356 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	MIS12	Q9H081	205 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	PXMP2	Q9NR77	195 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	SPATA7	Q9P0W8	599 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	IP6K2	Q9UHH9	426 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	CYTH4	Q9UIA0	394 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	DCAF8L1	A6NGE4	600 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	KCNN4	O15554	427 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	B4GALT5	O43286	388 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	TYROBP	O43914	113 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	C4BPA	P04003	597 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	SP100	P23497	879 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	SLC1A1	P43005	524 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	ATXN1	P54253	815 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	CACNA2D1	P54289	1103 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	PTPN20	Q4JDL3	420 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	FAM219B	Q5XKK7	198 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	USP37	Q86T82	979 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	SULF1	Q8IWU6	871 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	GSTCD	Q8NEC7	633 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	NSL1	Q96IY1	281 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	QTRT2	Q9H974	415 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	MAN1C1	Q9NR34	630 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	LGALS13	Q9UHV8	139 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	FEM1B	Q9UK73	627 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	UBIAD1	Q9Y5Z9	338 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	TCRBV9S1A1T	A0A576	114 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312		A6NHS1	94 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	MAN1A1	P33908	653 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	RPL10A	P62906	217 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	RALGPS1	Q5JS13	557 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.07	□□□□□ -0.32

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