RNA–Protein interactions for RNA: ENST00000445605.5

FAM49A-203, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 4

Gene FAM49A, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-203ENST00000445605 FAM84AQ96KN4 292 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 CEP295NLQ96MC4 621 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 KIF2CQ99661 725 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 GTPBP2Q9BX10 602 aaKnown RBP18.36■□□□□ 0.53
FAM49A-203ENST00000445605 PDE11AQ9HCR9 933 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 ARHGEF4Q9NR80 690 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 SMPD4Q9NXE4 827 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 CCDC39Q9UFE4 941 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 SIX4Q9UIU6 781 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 LHX6Q9UPM6 363 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 MSRB2Q9Y3D2 182 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 CPQQ9Y646 472 aa18.36■□□□□ 0.53
FAM49A-203ENST00000445605 CEP192Q8TEP8 1941 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 TNRC6BQ9UPQ9 1833 aaKnown RBP18.35■□□□□ 0.53
FAM49A-203ENST00000445605 ATXN2Q99700 1313 aaKnown RBP18.35■□□□□ 0.53
FAM49A-203ENST00000445605 TCRBV21S2A2A0A5A6 115 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 ZNF840PA6NDX5 716 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 SCAMP3O14828 347 aaKnown RBP18.35■□□□□ 0.53
FAM49A-203ENST00000445605 TRIM66O15016 1216 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 PDGFRBP09619 1106 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 LMO2P25791 158 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 EIF2DP41214 584 aaKnown RBP18.35■□□□□ 0.53
FAM49A-203ENST00000445605 GRIA2P42262 883 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 USP46P62068 366 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 KDSRQ06136 332 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 RING1Q06587 406 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 SLC23A3Q6PIS1 610 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 SFTPA1Q8IWL2 248 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 CXorf38Q8TB03 319 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 HPDLQ96IR7 371 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 STRA6Q9BX79 667 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 RNF38Q9H0F5 515 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 PCIF1Q9H4Z3 704 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 CFAP97Q9P2B7 532 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 MBD1Q9UIS9 605 aaPredicted RBP18.35■□□□□ 0.53
FAM49A-203ENST00000445605 PKD1L2Q7Z442 2459 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 MYO18AQ92614 2054 aaKnown RBP18.35■□□□□ 0.53
FAM49A-203ENST00000445605 ADAMTS9Q9P2N4 1935 aa18.35■□□□□ 0.53
FAM49A-203ENST00000445605 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.34■□□□□ 0.53
FAM49A-203ENST00000445605 AP5Z1O43299 807 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 TNNC2P02585 160 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 ADH5P11766 374 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 ITPKAP23677 461 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 TNFRSF4P43489 277 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 GFPT1Q06210 699 aaPredicted RBP18.34■□□□□ 0.53
FAM49A-203ENST00000445605 SF3A1Q15459 793 aaKnown RBP18.34■□□□□ 0.53
FAM49A-203ENST00000445605 DUOXA1Q1HG43 343 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 MAP7D1Q3KQU3 841 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 TDRD10Q5VZ19 366 aaKnown RBP18.34■□□□□ 0.53
FAM49A-203ENST00000445605 RHBDF2Q6PJF5 856 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 SV2BQ7L1I2 683 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 DDX42Q86XP3 938 aaKnown RBP eCLIP18.34■□□□□ 0.53
FAM49A-203ENST00000445605 CEP76Q8TAP6 659 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 EPSTI1Q96J88 318 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 MMS19Q96T76 1030 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 ZDHHC4Q9NPG8 344 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 CRTAC1Q9NQ79 661 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 STK17AQ9UEE5 414 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 PILRBQ9UKJ0 227 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 KLK13Q9UKR3 277 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 SLC6A14Q9UN76 642 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 CACNA1EQ15878 2313 aa18.34■□□□□ 0.53
FAM49A-203ENST00000445605 H0Y626 953 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 TRIM16O95361 564 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 MBL2P11226 248 aaPredicted RBP18.33■□□□□ 0.52
FAM49A-203ENST00000445605 IDEP14735 1019 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 HOXD12P35452 270 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 KIR2DL1P43626 348 aaPredicted RBP18.33■□□□□ 0.52
FAM49A-203ENST00000445605 RPL6Q02878 288 aaKnown RBP18.33■□□□□ 0.52
FAM49A-203ENST00000445605 MESP2Q0VG99 397 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 SEMA3BQ13214 749 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 RRAGBQ5VZM2 374 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 LARP1BQ659C4 914 aaKnown RBP18.33■□□□□ 0.52
FAM49A-203ENST00000445605 HS2ST1Q7LGA3 356 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 PIP4P1Q86T03 277 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 C12orf40Q86WS4 652 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 GPD1LQ8N335 351 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 MYCBPAPQ8TBZ2 947 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 KBTBD7Q8WVZ9 684 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 PCED1BQ96HM7 432 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 SLITRK1Q96PX8 696 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 CBWD1Q9BRT8 395 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 TTLL2Q9BWV7 592 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 INTS13Q9NVM9 706 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 TBC1D14Q9P2M4 693 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 PLXND1Q9Y4D7 1925 aa18.33■□□□□ 0.52
FAM49A-203ENST00000445605 A0A0A0MRY4 1105 aa18.32■□□□□ 0.52
FAM49A-203ENST00000445605 TBC1D3BA6NDS4 549 aa18.32■□□□□ 0.52
FAM49A-203ENST00000445605 UPK3BL1B0FP48 263 aa18.32■□□□□ 0.52
FAM49A-203ENST00000445605 UPK3BL2E5RIL1 263 aa18.32■□□□□ 0.52
FAM49A-203ENST00000445605 F8VP50 259 aa18.32■□□□□ 0.52
FAM49A-203ENST00000445605 ZBTB24O43167 697 aaPredicted RBP18.32■□□□□ 0.52
FAM49A-203ENST00000445605 OPHN1O60890 802 aa18.32■□□□□ 0.52
FAM49A-203ENST00000445605 ADAM23O75077 832 aa18.32■□□□□ 0.52
FAM49A-203ENST00000445605 WARSP23381 471 aaKnown RBP18.32■□□□□ 0.52
FAM49A-203ENST00000445605 NOP14P78316 857 aaKnown RBP18.32■□□□□ 0.52
FAM49A-203ENST00000445605 IFRD2Q12894 506 aaPredicted RBP18.32■□□□□ 0.52
FAM49A-203ENST00000445605 TAF10Q12962 218 aa18.32■□□□□ 0.52
FAM49A-203ENST00000445605 ALCAMQ13740 583 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms