RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PRPSAP2O60256 369 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 PDIA2Q13087 525 aaKnown RBP17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 ZNF268Q14587 947 aaPredicted RBP17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 C9orf57Q5W0N0 161 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 EXOC3L1Q86VI1 746 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 ZIC5Q96T25 663 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 PAIP2Q9BPZ3 127 aaKnown RBP17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 NR2E3Q9Y5X4 410 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 TRUB2O95900 331 aaKnown RBP17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 EIF3EP60228 445 aaKnown RBP17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 BIRC2Q13490 618 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 CA9Q16790 459 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 LRRC38Q5VT99 294 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 FAM172AQ8WUF8 416 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 LPPQ93052 612 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 ARHGAP39Q9C0H5 1083 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 ASNSD1Q9NWL6 643 aa17.61■□□□□ 0.41
LAPTM4B-201ENST00000445593 TCRBV7S3A2A0A539 114 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 CLDN5O00501 218 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 DNALI1O14645 258 aaPredicted RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 VIMP08670 466 aaKnown RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 RBP3P10745 1247 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 CTCFP49711 727 aaPredicted RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 OASLQ15646 514 aaKnown RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 GNASQ5JWF2 1037 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 HIBCHQ6NVY1 386 aaPredicted RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 LCLAT1Q6UWP7 414 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 SYDE1Q6ZW31 735 aaPredicted RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 MCRS1Q96EZ8 462 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 CXorf56Q9H5V9 222 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 H7C0C1 242 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 ATP5OP48047 213 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 INCA1Q0VD86 236 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 PAN2Q504Q3 1202 aaKnown RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 FBXO47Q5MNV8 452 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 NIPA2Q8N8Q9 360 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 SLC2A14Q8TDB8 520 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 FAM149B1Q96BN6 582 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 PGM2Q96G03 612 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 XPO6Q96QU8 1125 aaKnown RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 WDR35Q9P2L0 1181 aa17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 TPX2Q9ULW0 747 aaKnown RBP17.6■□□□□ 0.41
LAPTM4B-201ENST00000445593 PAPSS1O43252 624 aaPredicted RBP17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 ZKSCAN8Q15776 578 aaPredicted RBP17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 FSCN1Q16658 493 aaKnown RBP17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 MORN1Q5T089 497 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 DARS2Q6PI48 645 aaKnown RBP17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 TRAPPC3O43617 180 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 GABBR2O75899 941 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 CCDC14Q49A88 953 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 TTC31Q49AM3 519 aaPredicted RBP17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 PACS2Q86VP3 889 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 KIF9Q9HAQ2 790 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 EXOC1LA0A1B0GW35 172 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 TMEM120BA0PK00 339 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 C17orf102A2RUQ5 167 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 C2CD4BA6NLJ0 364 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 SPAG7O75391 227 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 FAM107AO95990 144 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 ZNF143P52747 638 aaPredicted RBP17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 BBS9Q3SYG4 887 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 CTU1Q7Z7A3 348 aaKnown RBP17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 IPPQ9Y573 584 aa17.59■□□□□ 0.41
LAPTM4B-201ENST00000445593 KPNA7A9QM74 516 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 AGTP01019 485 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 SDC4P31431 198 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 GNL1P36915 607 aaPredicted RBP17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 FKBP1BP68106 108 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 LMNB2Q03252 620 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 EFTUD2Q15029 972 aaKnown RBP eCLIP17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 RASAL3Q86YV0 1011 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 SGSM3Q96HU1 749 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 CNPY3Q9BT09 278 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 VRTNQ9H8Y1 702 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 GGT7Q9UJ14 662 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 SMIM35A0A1B0GVV1 85 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 MCF2LO15068 1137 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 CTGFP29279 349 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 RPL22P35268 128 aaKnown RBP17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 OSBPL7Q9BZF2 842 aa17.58■□□□□ 0.4
LAPTM4B-201ENST00000445593 SCN4AP35499 1836 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 SSTR1P30872 391 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 SMAD1Q15797 465 aaKnown RBP17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 KYAT1Q16773 422 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 MSS51Q4VC12 460 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 SLC35B2Q8TB61 432 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 TMPRSS4Q9NRS4 437 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 NAALADL1Q9UQQ1 740 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 BRAFP15056 766 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 MMP13P45452 471 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 CPT1AP50416 773 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 TRIM32Q13049 653 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 POLNQ7Z5Q5 900 aa17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 ZCCHC9Q8N567 271 aaKnown RBP17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 DHX35Q9H5Z1 703 aaKnown RBP17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 UBQLN1Q9UMX0 589 aaKnown RBP17.57■□□□□ 0.4
LAPTM4B-201ENST00000445593 KIAA0754O94854 1291 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 TKTP29401 623 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms