RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 TSPY1Q01534 308 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 CREMQ03060 361 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 NR1H3Q13133 447 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 CALCOCO2Q13137 446 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 EIF4EBP2Q13542 120 aaPredicted RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PTK6Q13882 451 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 BYSLQ13895 437 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 MRPL58Q14197 206 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 BTG3Q14201 252 aaPredicted RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 FRG1Q14331 258 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 HIC1Q14526 733 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SMC1AQ14683 1233 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PPP2R5DQ14738 602 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 MORF4L2Q15014 288 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SIX1Q15475 284 aaPredicted RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 OASLQ15646 514 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 P3H1Q32P28 736 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 ARL13BQ3SXY8 428 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PTPN20Q4JDL3 420 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 NOMO2Q5JPE7 1267 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 BRMS1LQ5PSV4 323 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 C6orf118Q5T5N4 469 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 ERMARDQ5T6L9 678 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PPP1R26Q5T8A7 1209 aaPredicted RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 AGBL2Q5U5Z8 902 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 TAF3Q5VWG9 929 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SNX30Q5VWJ9 437 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 TPGS2Q68CL5 300 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 LMBRD2Q68DH5 695 aaPredicted RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SLC9A4Q6AI14 798 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 KLHDC10Q6PID8 442 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 TRAF7Q6Q0C0 670 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 MMS22LQ6ZRQ5 1243 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 LRRC8DQ7L1W4 858 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 TADA2BQ86TJ2 420 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 MON1AQ86VX9 555 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 TTC30AQ86WT1 665 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 NPAS4Q8IUM7 802 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 CCNJLQ8IV13 435 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 FAM126BQ8IXS8 530 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 CCDC105Q8IYK2 499 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 ADGRF2Q8IZF7 708 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 HS6ST3Q8IZP7 471 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 FUKQ8N0W3 1084 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 OR6B3Q8NGW1 331 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SLC35B2Q8TB61 432 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SPPL2BQ8TCT7 592 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF296Q8WUU4 475 aaPredicted RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SEPT8Q92599 483 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 KHSRPQ92945 711 aaKnown RBP eCLIP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 EXOC4Q96A65 974 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 AZIN2Q96A70 460 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 MAGOHBQ96A72 148 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 ARMC5Q96C12 935 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 FAM212AQ96EL1 285 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PGM2Q96G03 612 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 CAPZA3Q96KX2 299 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SPATA17Q96L03 361 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SENP8Q96LD8 212 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 C8orf48Q96LL4 319 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 C1orf74Q96LT6 269 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SLITRK1Q96PX8 696 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SLC2A13Q96QE2 648 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 HAPLN3Q96S86 360 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 CPXM1Q96SM3 734 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PNKPQ96T60 521 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 KRT12Q99456 494 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 NPY6RQ99463 290 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 FMO2Q99518 471 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 VAT1Q99536 393 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 ADAM2Q99965 735 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 C19orf43Q9BQ61 176 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 C11orf70Q9BRQ4 267 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 NAT9Q9BTE0 207 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 COLEC11Q9BWP8 271 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 EIF2AQ9BY44 585 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 TXLNGYQ9BZA5 131 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 DCLK3Q9C098 648 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SDCBP2Q9H190 292 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 TRPV6Q9H1D0 765 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 OSBPL2Q9H1P3 480 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PABPC3Q9H361 631 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SMYD3Q9H7B4 428 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SYNCQ9H7C4 482 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 AGO3Q9H9G7 860 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 CDHR5Q9HBB8 845 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 POPDC2Q9HBU9 364 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 LRRC4Q9HBW1 653 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PCDH9Q9HC56 1237 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 EPB41L5Q9HCM4 733 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 ABCC13Q9NSE7 274 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 OLA1Q9NTK5 396 aaKnown RBP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 ZDHHC18Q9NUE0 388 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.96□□□□□ -1.94
LINC00393-201ENST00000443621 CLIC5Q9NZA1 410 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 SENP1Q9P0U3 644 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 AMACRQ9UHK6 382 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 PCDHB8Q9UN66 801 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 BACE2Q9Y5Z0 518 aa2.96□□□□□ -1.94
LINC00393-201ENST00000443621 TTC3P53804 2025 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms