RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 PCDHA8Q9Y5H6 950 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 TRPM1Q7Z4N2 1603 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 SYNJ2BP-COX16A0A087WUM0 186 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 LRRIQ4A6NIV6 560 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 SPTLC1O15269 473 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 KCNN4O15554 427 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 RPA1P27694 616 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 HNRNPH3P31942 346 aaKnown RBP10.68□□□□□ -0.7
LIN54-202ENST00000442461 GSSP48637 474 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 LSAMPQ13449 338 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 CCDC142Q17RM4 750 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 KCNT1Q5JUK3 1230 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 GJB7Q6PEY0 223 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 SNX32Q86XE0 403 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 DHFR2Q86XF0 187 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 SVOPQ8N4V2 548 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 TMEM109Q9BVC6 243 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 KIAA1586Q9HCI6 787 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 COX16Q9P0S2 106 aa10.68□□□□□ -0.7
LIN54-202ENST00000442461 GSG1L2A8MUP6 293 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 CLDN25C9JDP6 229 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 TDP2O95551 362 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 LDLRP01130 860 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 C6orf10Q5SRN2 563 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 RWDD4Q6NW29 188 aaKnown RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 NEK5Q6P3R8 708 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 AMER2Q8N7J2 671 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 C19orf18Q8NEA5 215 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 ZSCAN18Q8TBC5 510 aaPredicted RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 PROX1Q92786 737 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 SLC5A5Q92911 643 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 BDH2Q9BUT1 245 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 CCDC59Q9P031 241 aaKnown RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 NXF1Q9UBU9 619 aaKnown RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 PCYOX1Q9UHG3 505 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 GNEQ9Y223 722 aaKnown RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 CST8O60676 142 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 SERPINE1P05121 402 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 APOA4P06727 396 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 RPL10AP62906 217 aaKnown RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.67□□□□□ -0.7
LIN54-202ENST00000442461 MMRN1Q13201 1228 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 POLD3Q15054 466 aaPredicted RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 OTUD3Q5T2D3 398 aaPredicted RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 GALNT18Q6P9A2 607 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 SH3RF1Q7Z6J0 888 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 C11orf74Q86VG3 221 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 CDHR1Q96JP9 859 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 ZNF577Q9BSK1 485 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 MBD2Q9UBB5 411 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 DNAJB4Q9UDY4 337 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 ADGBQ8N7X0 1667 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 A0A0G2JLW4 131 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 PTGES3LE9PB15 166 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 BOLA2-SMG1P6H3BVE0 249 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 H7C1W4 665 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 RNF225M0QZC1 329 aaPredicted RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 RNF103O00237 685 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 FOXN3O00409 490 aaPredicted RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 HSPA2P54652 639 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 PKNOX1P55347 436 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 TNFAIP2Q03169 654 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 KLHDC10Q6PID8 442 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 RBM15BQ8NDT2 890 aaKnown RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 OSCP1Q8WVF1 389 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 GINS4Q9BRT9 223 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 TEX13BQ9BXU2 312 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 C12orf4Q9NQ89 552 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 ENTPD7Q9NQZ7 604 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 CHKBQ9Y259 395 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 SALL1Q9NSC2 1324 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 PRAMEF22A3QJZ6 481 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 FOXD4Q12950 439 aaPredicted RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 CSTF3Q12996 717 aaKnown RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 COG2Q14746 738 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 NADK2Q4G0N4 442 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 ZNF394Q53GI3 561 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 C12orf60Q5U649 245 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 DPP8Q6V1X1 898 aaPredicted RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 DNAAF5Q86Y56 855 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 RNF135Q8IUD6 432 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 FAM47BQ8NA70 645 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 PDPRQ8NCN5 879 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 ZNF317Q96PQ6 595 aaPredicted RBP10.67□□□□□ -0.7
LIN54-202ENST00000442461 NYXQ9GZU5 481 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 CXorf21Q9HAI6 301 aa10.67□□□□□ -0.7
LIN54-202ENST00000442461 PNMA6FA0A0J9YX94 578 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 GH1P01241 217 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 GZMAP12544 262 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 ADSSP30520 456 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 HOXD12P35452 270 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 COPZ1P61923 177 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 TFDP1Q14186 410 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 MAPRE1Q15691 268 aaKnown RBP10.66□□□□□ -0.7
LIN54-202ENST00000442461 TAB1Q15750 504 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 KLHL17Q6TDP4 642 aa10.66□□□□□ -0.7
LIN54-202ENST00000442461 TPTE2Q6XPS3 522 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms