RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ITIH3Q06033 890 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 ADCY1Q08828 1119 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 OTOP2Q7RTS6 562 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 PLEKHA4Q9H4M7 779 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 CWH43Q9H720 699 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 PATJQ8NI35 1801 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 SF3B1O75533 1304 aaKnown RBP eCLIP20.04■□□□□ 0.83e-6■■■■■ 137.9
SNX17-203ENST00000440760 TCRBV7S2A1N4TA0A589 114 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 KRIT1O00522 736 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 PDGFRAP16234 1089 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 ACADSBP45954 432 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 SMTNL2Q2TAL5 461 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 SLC39A12Q504Y0 691 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 KLHL7Q8IXQ5 586 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 TOP1MTQ969P6 601 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 PNKPQ96T60 521 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 TMEM175Q9BSA9 504 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 HERPUD2Q9BSE4 406 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 LRRC4Q9HBW1 653 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 PI4K2BG5E9Z4 385 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 SYN3O14994 580 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 OAZ2O95190 189 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 AMHP03971 560 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 IL1R2P27930 398 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 TKTL1P51854 596 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 ZNF143P52747 638 aaPredicted RBP20.03■□□□□ 0.8
SNX17-203ENST00000440760 ATP11AP98196 1134 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 SLC25A11Q02978 314 aaKnown RBP20.03■□□□□ 0.8
SNX17-203ENST00000440760 RTP2Q5QGT7 225 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 TAS1R1Q7RTX1 841 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 ANKS1BQ7Z6G8 1248 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 MMGT1Q8N4V1 131 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 KRT12Q99456 494 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 HINFPQ9BQA5 517 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 ZWILCHQ9H900 591 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 CYLDQ9NQC7 956 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 TTC7AQ9ULT0 858 aaPredicted RBP20.03■□□□□ 0.8
SNX17-203ENST00000440760 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNX17-203ENST00000440760 HHLA1C9JL84 531 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 TFE3P19532 575 aaPredicted RBP20.03■□□□□ 0.8
SNX17-203ENST00000440760 SNX16P57768 344 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 CCDC14Q49A88 953 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 CTXN3Q4LDR2 81 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 ZFYVE27Q5T4F4 411 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 SLC26A9Q7LBE3 791 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 ZDHHC17Q8IUH5 632 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 CCDC50Q8IVM0 306 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 SIX6OS1Q8N1H7 587 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 GPR161Q8N6U8 529 aaKnown RBP20.03■□□□□ 0.8
SNX17-203ENST00000440760 KCTD13Q8WZ19 329 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 LRRC1Q9BTT6 524 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 PCSK1NQ9UHG2 260 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 LCMT1Q9UIC8 334 aa20.03■□□□□ 0.8
SNX17-203ENST00000440760 KIAA1671Q9BY89 1806 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 KRT1P04264 644 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 FGFR3P22607 806 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 KCNT1Q5JUK3 1230 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 SPATA2LQ8IUW3 424 aaPredicted RBP20.02■□□□□ 0.8
SNX17-203ENST00000440760 KATNAL2Q8IYT4 538 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 ZDHHC14Q8IZN3 488 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 ANKRD7Q92527 254 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 FAM149B1Q96BN6 582 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 PGLYRP2Q96PD5 576 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 CNPY3Q9BT09 278 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 ADAM33Q9BZ11 813 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 ULBP1Q9BZM6 244 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 ZCWPW1Q9H0M4 648 aa20.02■□□□□ 0.8
SNX17-203ENST00000440760 DDX47Q9H0S4 455 aaKnown RBP20.02■□□□□ 0.8
SNX17-203ENST00000440760 RC3H2Q9HBD1 1191 aaKnown RBP20.02■□□□□ 0.8
SNX17-203ENST00000440760 ABI2Q9NYB9 513 aaPredicted RBP20.02■□□□□ 0.8
SNX17-203ENST00000440760 CYP2F1P24903 491 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 SPOUT1Q5T280 376 aaKnown RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 HFE2Q6ZVN8 426 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 C16orf59Q7L2K0 433 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 STKLD1Q8NE28 680 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 HDAC7Q8WUI4 952 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 RNF25Q96BH1 459 aaPredicted RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 PEBP4Q96S96 227 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 CSNK1G1Q9HCP0 422 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 NGRNQ9NPE2 291 aaKnown RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 IL23AQ9NPF7 189 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 MIPP30301 263 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 SDC4P31431 198 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 ALDH7A1P49419 539 aaKnown RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 ARPP19P56211 112 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 MRPS5P82675 430 aaKnown RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 SLC7A5Q01650 507 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 MAPRE1Q15691 268 aaKnown RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 C8orf74Q6P047 294 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 SLC13A5Q86YT5 568 aaPredicted RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 BADQ92934 168 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 ZNF689Q96CS4 500 aaPredicted RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 VN1R3Q9BXE9 311 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 PARD6BQ9BYG5 372 aa20.01■□□□□ 0.79
SNX17-203ENST00000440760 DMAP1Q9NPF5 467 aaPredicted RBP20.01■□□□□ 0.79
SNX17-203ENST00000440760 MYO16Q9Y6X6 1858 aa20■□□□□ 0.79
SNX17-203ENST00000440760 ZBBXA8MT70 800 aa20■□□□□ 0.79
SNX17-203ENST00000440760 DPYSL4O14531 572 aa20■□□□□ 0.79
SNX17-203ENST00000440760 ZMYND10O75800 440 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms