RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 GABRB2P47870 512 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 RAD23BP54727 409 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 OSTNP61366 133 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 NFX1Q12986 1120 aaKnown RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 PDCLQ13371 301 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 ZNF268Q14587 947 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 MFSD10Q14728 455 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 ZSCAN26Q16670 478 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 TFDP3Q5H9I0 405 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 MARCH8Q5T0T0 291 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 CATSPER4Q7RTX7 472 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 DGLUCYQ7Z3D6 616 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 VSIG1Q86XK7 387 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 DDX42Q86XP3 938 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 SUGP1Q8IWZ8 645 aaKnown RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 KIAA0319LQ8IZA0 1049 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 TTC13Q8NBP0 860 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 ATL2Q8NHH9 583 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 CXorf38Q8TB03 319 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 FBXO25Q8TCJ0 367 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 RIN2Q8WYP3 895 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 TMEM176AQ96HP8 235 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 SCLYQ96I15 445 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 HPDLQ96IR7 371 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 CCDC114Q96M63 670 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 SLITRK1Q96PX8 696 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 TRAIPQ9BWF2 469 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 SMYD3Q9H7B4 428 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 DPP3Q9NY33 737 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 CNTN3Q9P232 1028 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 NXF1Q9UBU9 619 aaKnown RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 CHORDC1Q9UHD1 332 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 GNEQ9Y223 722 aaKnown RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 NR2E1Q9Y466 385 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 TRIP11Q15643 1979 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 SCN10AQ9Y5Y9 1956 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 ATXN2Q99700 1313 aaKnown RBP9.6□□□□□ -0.87
HDAC6-209ENST00000440653 ERICH4A6NGS2 130 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 M0QYV0 167 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SMAPO00193 183 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 O00370 1275 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 ERBB2P04626 1255 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SMIM10L2AP0DMW4 78 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SMIM10L2BP0DMW5 78 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 RALAP11233 206 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 DARSP14868 501 aaKnown RBP9.6□□□□□ -0.87
HDAC6-209ENST00000440653 PSMA2P25787 234 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SCNN1AP37088 669 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SSR1P43307 286 aaKnown RBP9.6□□□□□ -0.87
HDAC6-209ENST00000440653 PLTPP55058 493 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 TAS2R40P59535 323 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 ZNF252P-AS1Q0IIN9 211 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 CNGA2Q16280 664 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SLC10A6Q3KNW5 377 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 KRT71Q3SY84 523 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 PTPN20Q4JDL3 420 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 AADACL2Q6P093 401 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 UNC93AQ86WB7 457 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SPATS2Q86XZ4 545 aaKnown RBP9.6□□□□□ -0.87
HDAC6-209ENST00000440653 ZDHHC17Q8IUH5 632 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 ADHFE1Q8IWW8 467 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 NME8Q8N427 588 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 FBXL6Q8N531 539 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SLC4A11Q8NBS3 891 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 TFAP2BQ92481 460 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 MCRS1Q96EZ8 462 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 KIF12Q96FN5 646 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 PGM2Q96G03 612 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 CPB2Q96IY4 423 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 NT5C1AQ9BXI3 368 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 TRIM31Q9BZY9 425 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 TRIM7Q9C029 511 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 TRIM6Q9C030 488 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-209ENST00000440653 FAM107BQ9H098 131 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 AP5M1Q9H0R1 490 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 ADAMTS10Q9H324 1103 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 HIPK3Q9H422 1215 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 PPCSQ9HAB8 311 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 CYLDQ9NQC7 956 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 LMCD1Q9NZU5 365 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 UBQLN1Q9UMX0 589 aaKnown RBP9.6□□□□□ -0.87
HDAC6-209ENST00000440653 POLIQ9UNA4 740 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 ATP8A1Q9Y2Q0 1164 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 SNX24Q9Y343 169 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 NFS1Q9Y697 457 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 TSC2P49815 1807 aa9.6□□□□□ -0.87
HDAC6-209ENST00000440653 GRIN2DO15399 1336 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 hCG_1818297A0A087WSY0 165 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 LCHNA4D1U4 455 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 MOXD2PA6NHM9 499 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 ZNF487B1APH4 448 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 HAS3O00219 553 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 DPYSL4O14531 572 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 RNF8O76064 485 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 MICAL2O94851 1124 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 NPTXRO95502 500 aa9.59□□□□□ -0.87
HDAC6-209ENST00000440653 CALCAP01258 141 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms