RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 CPT1BQ92523 772 aa8.59□□□□□ -1.03
SPIRE1-204ENST00000440472 HSFY1Q96LI6 401 aa8.59□□□□□ -1.03
SPIRE1-204ENST00000440472 RNF157Q96PX1 679 aa8.59□□□□□ -1.03
SPIRE1-204ENST00000440472 ZNF670Q9BS34 389 aa8.59□□□□□ -1.03
SPIRE1-204ENST00000440472 C11orf84Q9BUA3 381 aaPredicted RBP8.59□□□□□ -1.03
SPIRE1-204ENST00000440472 GPBP1L1Q9HC44 474 aaPredicted RBP8.59□□□□□ -1.03
SPIRE1-204ENST00000440472 KLHL11Q9NVR0 708 aa8.59□□□□□ -1.03
SPIRE1-204ENST00000440472 TJP2Q9UDY2 1190 aa8.59□□□□□ -1.03
SPIRE1-204ENST00000440472 BCLAF3A2AJT9 711 aaKnown RBP8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 SGK1O00141 431 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 CHADO15335 359 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 SNX3O60493 162 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 DNAJC8O75937 253 aaPredicted RBP8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 GSTA2P09210 222 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 BRAFP15056 766 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 PDGFRAP16234 1089 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 ZFXP17010 805 aaPredicted RBP8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 RPL22P35268 128 aaKnown RBP8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 XRCC4Q13426 336 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 DPYSL3Q14195 570 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 HIF1AQ16665 826 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 KLHL38Q2WGJ6 581 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 TTC31Q49AM3 519 aaPredicted RBP8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 ANKRD20A8PQ5CZ79 823 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 GJC2Q5T442 439 aaPredicted RBP8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 FAM183BPQ6ZVS7 135 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 DPH6Q7L8W6 267 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 SLC26A9Q7LBE3 791 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 MICALL1Q8N3F8 863 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 ATP11CQ8NB49 1132 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 DENND1AQ8TEH3 1009 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 RSAD2Q8WXG1 361 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 KHSRPQ92945 711 aaKnown RBP eCLIP8.58□□□□□ -1.041e-7■■■■□ 24
SPIRE1-204ENST00000440472 ZBTB10Q96DT7 871 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 ZNF560Q96MR9 790 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 PRMT1Q99873 361 aaKnown RBP8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 TMEM121Q9BTD3 319 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 ZWILCHQ9H900 591 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 PNPLA8Q9NP80 782 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 NKIRAS1Q9NYS0 192 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 SAMD15Q9P1V8 674 aa8.58□□□□□ -1.04
SPIRE1-204ENST00000440472 EXOC1LA0A1B0GW35 172 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 FAM47DPA6NHR8 397 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 SMIM23A6NLE4 172 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 PRPSAP2O60256 369 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 NPTXRO95502 500 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ZSCAN5DPP0CG00 497 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 SMIM10L2AP0DMW4 78 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 SMIM10L2BP0DMW5 78 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 CTCFP49711 727 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 VPS41P49754 854 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 EIF3EP60228 445 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 KCTD19Q17RG1 926 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 GOLGA7BQ2TAP0 167 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 CCDC14Q49A88 953 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 C9orf57Q5W0N0 161 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 OLFML2BQ68BL8 750 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 OR6B2Q6IFH4 312 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ADGRD1Q6QNK2 874 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 CATSPER4Q7RTX7 472 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 RFX6Q8HWS3 928 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 CYP4X1Q8N118 509 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 GBP7Q8N8V2 638 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ANKRD52Q8NB46 1076 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 UHMK1Q8TAS1 419 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 KAT2BQ92831 832 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 APBB2Q92870 758 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ALKBH8Q96BT7 664 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ZNF668Q96K58 619 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 C9orf72Q96LT7 481 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 PEBP4Q96S96 227 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 MAK16Q9BXY0 300 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 OSBPL7Q9BZF2 842 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 RABEP2Q9H5N1 569 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ACSS3Q9H6R3 686 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 PAK5Q9P286 719 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 RCOR3Q9P2K3 495 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 PSMC3IPQ9P2W1 217 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 HESX1Q9UBX0 185 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 E5RJQ4 531 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ASMTLO95671 621 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 NR2C2P49116 596 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 BCAT1P54687 386 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 GEMIN4P57678 1058 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 IL9RQ01113 521 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 PLCB3Q01970 1234 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ROR1Q01973 937 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 BST2Q10589 180 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 MAP2K5Q13163 448 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 PPP1R26Q5T8A7 1209 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 TRNP1Q6NT89 227 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 TTC30AQ86WT1 665 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 CCDC13Q8IYE1 715 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 EMC1Q8N766 993 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 MCUQ8NE86 351 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 NPLOC4Q8TAT6 608 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 LRRC39Q96DD0 335 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 ZMAT2Q96NC0 199 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 FAM118BQ9BPY3 351 aa8.57□□□□□ -1.04
SPIRE1-204ENST00000440472 KATNAL1Q9BW62 490 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms