RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 CNDP1Q96KN2 507 aa21.28■■□□□ 1
FMR1-208ENST00000440235 NT5C1AQ9BXI3 368 aa21.28■■□□□ 1
FMR1-208ENST00000440235 RNPEPL1Q9HAU8 725 aa21.28■■□□□ 1
FMR1-208ENST00000440235 A0A1W2PPM1 405 aa21.28■■□□□ 1
FMR1-208ENST00000440235 KCNK1O00180 336 aa21.28■■□□□ 1
FMR1-208ENST00000440235 PROCP04070 461 aa21.28■■□□□ 1
FMR1-208ENST00000440235 KBTBD12Q3ZCT8 623 aa21.28■■□□□ 1
FMR1-208ENST00000440235 FRA10AC1Q70Z53 315 aa21.28■■□□□ 1
FMR1-208ENST00000440235 C4orf32Q8N8J7 132 aa21.28■■□□□ 1
FMR1-208ENST00000440235 PARD3BQ8TEW8 1205 aa21.28■■□□□ 1
FMR1-208ENST00000440235 IFT43Q96FT9 208 aa21.28■■□□□ 1
FMR1-208ENST00000440235 WNK4Q96J92 1243 aa21.28■■□□□ 1
FMR1-208ENST00000440235 C3orf70A6NLC5 250 aaPredicted RBP21.27■■□□□ 1
FMR1-208ENST00000440235 SPRP35270 261 aaPredicted RBP21.27■■□□□ 1
FMR1-208ENST00000440235 PTDSS1P48651 473 aaKnown RBP21.27■■□□□ 1
FMR1-208ENST00000440235 PCYT1AP49585 367 aa21.27■■□□□ 1
FMR1-208ENST00000440235 OASLQ15646 514 aaKnown RBP21.27■■□□□ 1
FMR1-208ENST00000440235 CCDC85BQ15834 202 aaPredicted RBP21.27■■□□□ 1
FMR1-208ENST00000440235 GOLGA7BQ2TAP0 167 aa21.27■■□□□ 1
FMR1-208ENST00000440235 RXFP2Q8WXD0 754 aa21.27■■□□□ 1
FMR1-208ENST00000440235 SEPT1Q8WYJ6 367 aa21.27■■□□□ 1
FMR1-208ENST00000440235 AP5M1Q9H0R1 490 aa21.27■■□□□ 1
FMR1-208ENST00000440235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.27■■□□□ 11e-11■■■■□ 19.8
FMR1-208ENST00000440235 NKRFO15226 690 aaKnown RBP eCLIP21.27■■□□□ 1
FMR1-208ENST00000440235 POLBP06746 335 aa21.27■■□□□ 1
FMR1-208ENST00000440235 TGM2P21980 687 aa21.27■■□□□ 1
FMR1-208ENST00000440235 EFNA5P52803 228 aa21.27■■□□□ 1
FMR1-208ENST00000440235 CYP24A1Q07973 514 aa21.27■■□□□ 1
FMR1-208ENST00000440235 SGO1Q5FBB7 561 aa21.27■■□□□ 1
FMR1-208ENST00000440235 LRRC74BQ6ZQY2 392 aa21.27■■□□□ 1
FMR1-208ENST00000440235 ETNPPLQ8TBG4 499 aa21.27■■□□□ 1
FMR1-208ENST00000440235 CKAP2Q8WWK9 683 aa21.27■■□□□ 1
FMR1-208ENST00000440235 CRAMP1Q96RY5 1269 aa21.27■■□□□ 1
FMR1-208ENST00000440235 SRPK1Q96SB4 655 aaKnown RBP21.27■■□□□ 1
FMR1-208ENST00000440235 HPS4Q9NQG7 708 aa21.27■■□□□ 1
FMR1-208ENST00000440235 C2CD2Q9Y426 696 aa21.27■■□□□ 1
FMR1-208ENST00000440235 PTGER2P43116 358 aa21.27■■□□□ 1
FMR1-208ENST00000440235 PKNOX1P55347 436 aa21.27■■□□□ 1
FMR1-208ENST00000440235 SLC25A3Q00325 362 aa21.27■■□□□ 1
FMR1-208ENST00000440235 NFIL3Q16649 462 aa21.27■■□□□ 1
FMR1-208ENST00000440235 DUPD1Q68J44 220 aa21.27■■□□□ 1
FMR1-208ENST00000440235 APTXQ7Z2E3 356 aaKnown RBP21.27■■□□□ 1
FMR1-208ENST00000440235 AMIGO3Q86WK7 504 aa21.27■■□□□ 1
FMR1-208ENST00000440235 CPNE8Q86YQ8 564 aa21.27■■□□□ 1
FMR1-208ENST00000440235 WDR35Q9P2L0 1181 aa21.27■■□□□ 1
FMR1-208ENST00000440235 ADAMTS7Q9UKP4 1686 aa21.27■■□□□ 1
FMR1-208ENST00000440235 CTSHP09668 335 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 EXD1Q8NHP7 514 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 CEP19Q96LK0 163 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 C2orf40Q9H1Z8 148 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.26■□□□□ 0.99
FMR1-208ENST00000440235 SLC12A6Q9UHW9 1150 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 FZD1Q9UP38 647 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 LRP6O75581 1613 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 RPL7AP62424 266 aaKnown RBP21.26■□□□□ 0.99
FMR1-208ENST00000440235 LBRQ14739 615 aaKnown RBP21.26■□□□□ 0.99
FMR1-208ENST00000440235 UTS2BQ765I0 119 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 SLC26A11Q86WA9 606 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 DDX28Q9NUL7 540 aaKnown RBP21.26■□□□□ 0.99
FMR1-208ENST00000440235 SPTLC1O15269 473 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 CLPTM1O96005 669 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 VCPP55072 806 aaKnown RBP21.26■□□□□ 0.99
FMR1-208ENST00000440235 KIZQ2M2Z5 673 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 EFCAB12Q6NXP0 572 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 PPP1R13LQ8WUF5 828 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 ATXN2LQ8WWM7 1075 aaKnown RBP21.26■□□□□ 0.99
FMR1-208ENST00000440235 TNFRSF25Q93038 417 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 USP18Q9UMW8 372 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 PRRC2BQ5JSZ5 2229 aaKnown RBP21.26■□□□□ 0.99
FMR1-208ENST00000440235 ASTN1O14525 1302 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 DNALI1O14645 258 aaPredicted RBP21.26■□□□□ 0.99
FMR1-208ENST00000440235 PSTPIP1O43586 416 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 TM4SF1P30408 202 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 CCNA1P78396 465 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 IMPG1Q17R60 797 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 GIPC2Q8TF65 315 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 FAM172AQ8WUF8 416 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 AFG1LQ8WV93 481 aa21.26■□□□□ 0.99
FMR1-208ENST00000440235 COL14A1Q05707 1796 aaKnown RBP21.25■□□□□ 0.99
FMR1-208ENST00000440235 SUPT7LO94864 414 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 FSTL1Q12841 308 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 PAN2Q504Q3 1202 aaKnown RBP21.25■□□□□ 0.99
FMR1-208ENST00000440235 CYP2R1Q6VVX0 501 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 BTBD10Q9BSF8 475 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 GCOM2Q9BZD3 368 aaPredicted RBP21.25■□□□□ 0.99
FMR1-208ENST00000440235 CCDC134Q9H6E4 229 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 CLIC5Q9NZA1 410 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 COL1A1P02452 1464 aaPredicted RBP21.25■□□□□ 0.99
FMR1-208ENST00000440235 LINC00854A0A1B0GVQ3 168 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 GTPBP10A4D1E9 387 aaKnown RBP21.25■□□□□ 0.99
FMR1-208ENST00000440235 SNUPNO95149 360 aaKnown RBP21.25■□□□□ 0.99
FMR1-208ENST00000440235 FGRP09769 529 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 ETFBP38117 255 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 RBP5P82980 135 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 UBE3AQ05086 875 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 SLC34A1Q06495 639 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 PDAP1Q13442 181 aaKnown RBP21.25■□□□□ 0.99
FMR1-208ENST00000440235 CYLC2Q14093 348 aaPredicted RBP21.25■□□□□ 0.99
FMR1-208ENST00000440235 TAS2R42Q7RTR8 314 aa21.25■□□□□ 0.99
FMR1-208ENST00000440235 PLEKHA5Q9HAU0 1116 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms