RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 STK38LQ9Y2H1 464 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 M0QZ92 97 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 ADCY8P40145 1251 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 PSMC4P43686 418 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 PLCB3Q01970 1234 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 CNGA2Q16280 664 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 C6orf118Q5T5N4 469 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 CYP4F22Q6NT55 531 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 MFSD7Q6UXD7 560 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 RCOR2Q8IZ40 523 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 C12orf50Q8NA57 414 aaPredicted RBP14.83□□□□□ -0.04
LIMD1-202ENST00000440097 DCLK3Q9C098 648 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 ARHGAP39Q9C0H5 1083 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 GRHL1Q9NZI5 618 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 PCSK1NQ9UHG2 260 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 SIGLEC16A6NMB1 481 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 OAS1P00973 400 aaKnown RBP14.83□□□□□ -0.04
LIMD1-202ENST00000440097 CTSHP09668 335 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 GBP1P32455 592 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 DRG2P55039 364 aaKnown RBP14.83□□□□□ -0.04
LIMD1-202ENST00000440097 DYNLT1P63172 113 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 ADCY2Q08462 1091 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 GOLGA7BQ2TAP0 167 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 GALNTL6Q49A17 601 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 OR6B2Q6IFH4 312 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 XYLT1Q86Y38 959 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 KLHL29Q96CT2 875 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 GOLGA2P5Q9HBQ8 144 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 HOMER3Q9NSC5 361 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 WDR35Q9P2L0 1181 aa14.83□□□□□ -0.04
LIMD1-202ENST00000440097 USP15Q9Y4E8 981 aaPredicted RBP14.83□□□□□ -0.04
LIMD1-202ENST00000440097 TCRBV5S1A1TA0A578 114 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 A8MXQ7 604 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 HAS3O00219 553 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 GRAP2O75791 330 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 RNF8O76064 485 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 TJP3O95049 919 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 PDGFRBP09619 1106 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 CTGFP29279 349 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 GPD2P43304 727 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 SARNPP82979 210 aaKnown RBP14.82□□□□□ -0.04
LIMD1-202ENST00000440097 INCA1Q0VD86 236 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 IRF5Q13568 498 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 LRRC14Q15048 493 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 PCBP1Q15365 356 aaKnown RBP eCLIP14.82□□□□□ -0.04
LIMD1-202ENST00000440097 HADHQ16836 314 aaKnown RBP14.82□□□□□ -0.04
LIMD1-202ENST00000440097 PPP1R15BQ5SWA1 713 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 TTC39CQ8N584 583 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 ATL2Q8NHH9 583 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 MGARPQ8TDB4 240 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 SLITRK1Q96PX8 696 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 SPC25Q9HBM1 224 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 FGFR1OP2Q9NVK5 253 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 UBQLN1Q9UMX0 589 aaKnown RBP14.82□□□□□ -0.04
LIMD1-202ENST00000440097 AXLP30530 894 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 CRYBB1P53674 252 aaPredicted RBP14.82□□□□□ -0.04
LIMD1-202ENST00000440097 COPS2P61201 443 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 ADAM17P78536 824 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 BIRC2Q13490 618 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 SPATS2LQ9NUQ6 558 aaKnown RBP14.82□□□□□ -0.04
LIMD1-202ENST00000440097 HESX1Q9UBX0 185 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 ZNF148Q9UQR1 794 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 DERAQ9Y315 318 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
LIMD1-202ENST00000440097 SCN1AP35498 2009 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 SMIM28A0A1B0GU29 152 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 E5RJQ4 531 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 ATF2P15336 505 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 FCGRTP55899 365 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 KLF1Q13351 362 aaPredicted RBP14.81□□□□□ -0.04
LIMD1-202ENST00000440097 CDO1Q16878 200 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 FBXO47Q5MNV8 452 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 PPP1R26Q5T8A7 1209 aaPredicted RBP14.81□□□□□ -0.04
LIMD1-202ENST00000440097 MFSD14CQ5VZR4 134 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 C9orf57Q5W0N0 161 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 DYDC1Q8WWB3 177 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 TRIM33Q9UPN9 1127 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 Q9Y3F1 56 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 TRPM7Q96QT4 1865 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 ENO4A6NNW6 628 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 TCP11X1B4DZS4 312 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 DUSP11O75319 330 aaKnown RBP14.81□□□□□ -0.04
LIMD1-202ENST00000440097 LRCH4O75427 683 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 MYCP01106 439 aaPredicted RBP14.81□□□□□ -0.04
LIMD1-202ENST00000440097 BNIP1Q12981 228 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 CCNG2Q16589 344 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 TFDP3Q5H9I0 405 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 SPOCD1Q6ZMY3 1216 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 DNAJC17Q9NVM6 304 aaKnown RBP14.81□□□□□ -0.04
LIMD1-202ENST00000440097 DDX56Q9NY93 547 aaKnown RBP14.81□□□□□ -0.04
LIMD1-202ENST00000440097 GABRQQ9UN88 632 aa14.81□□□□□ -0.04
LIMD1-202ENST00000440097 MSH2P43246 934 aa14.8□□□□□ -0.04
LIMD1-202ENST00000440097 FLT3LGP49771 235 aa14.8□□□□□ -0.04
LIMD1-202ENST00000440097 AUHQ13825 339 aaKnown RBP14.8□□□□□ -0.04
LIMD1-202ENST00000440097 PRUNE1Q86TP1 453 aa14.8□□□□□ -0.04
LIMD1-202ENST00000440097 TRPV1Q8NER1 839 aa14.8□□□□□ -0.04
LIMD1-202ENST00000440097 HSPH1Q92598 858 aa14.8□□□□□ -0.04
LIMD1-202ENST00000440097 FAM167BQ9BTA0 163 aa14.8□□□□□ -0.04
LIMD1-202ENST00000440097 CNTN3Q9P232 1028 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms