RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 TUBB8Q3ZCM7 444 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 CCDC14Q49A88 953 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 KCNT1Q5JUK3 1230 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 FAM26DQ5JW98 314 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 KCTD16Q68DU8 428 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 KDM7AQ6ZMT4 941 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 CROCCP2Q86T23 111 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 HOOK3Q86VS8 718 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 VSIG1Q86XK7 387 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 SH2D3CQ8N5H7 860 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 KCTD6Q8NC69 237 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 B3GALNT2Q8NCR0 500 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 TEKT4Q8WW24 435 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 GAD1Q99259 594 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 TBCBQ99426 244 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 HNRNPABQ99729 332 aaKnown RBP12.34□□□□□ -0.43
SMAD3-202ENST00000439724 LPIN3Q9BQK8 851 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 TMEM109Q9BVC6 243 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 RSAD1Q9HA92 442 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 PCSK1NQ9UHG2 260 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 DDX20Q9UHI6 824 aaKnown RBP12.34□□□□□ -0.43
SMAD3-202ENST00000439724 ANAPC5Q9UJX4 755 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 ZNF148Q9UQR1 794 aa12.34□□□□□ -0.43
SMAD3-202ENST00000439724 NDC80O14777 642 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 XPO1O14980 1071 aaKnown RBP12.33□□□□□ -0.44
SMAD3-202ENST00000439724 RIPK2O43353 540 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 PRPSAP2O60256 369 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 CST8O60676 142 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 CAND2O75155 1236 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 CAPN2P17655 700 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 HOXD10P28358 340 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 TKTP29401 623 aaKnown RBP12.33□□□□□ -0.44
SMAD3-202ENST00000439724 RPL9P32969 192 aaKnown RBP12.33□□□□□ -0.44
SMAD3-202ENST00000439724 IFFO1Q0D2I5 559 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 PDK2Q15119 407 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 TAF5Q15542 800 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 TRIM71Q2Q1W2 868 aaKnown RBP12.33□□□□□ -0.44
SMAD3-202ENST00000439724 C15orf59Q2T9L4 293 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-202ENST00000439724 KRT71Q3SY84 523 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 BOLA3Q53S33 107 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 SH3PXD2AQ5TCZ1 1133 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 IZUMO3Q5VZ72 239 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 WSCD1Q658N2 575 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 HIBCHQ6NVY1 386 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-202ENST00000439724 AGMOQ6ZNB7 445 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 CEP128Q6ZU80 1094 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 GSTA5Q7RTV2 222 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 RELL1Q8IUW5 271 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 TMEM86AQ8N2M4 240 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 ACTL9Q8TC94 416 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 SLC2A14Q8TDB8 520 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 C11orf84Q9BUA3 381 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-202ENST00000439724 PCDH9Q9HC56 1237 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 PADI3Q9ULW8 664 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
SMAD3-202ENST00000439724 TSC2P49815 1807 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 ARL5CA6NH57 179 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 APOC4-APOC2K7ER74 178 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 DNALI1O14645 258 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-202ENST00000439724 GRAP2O75791 330 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 APOC2P02655 101 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CD48P09326 243 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 PTPN1P18031 435 aaKnown RBP12.32□□□□□ -0.44
SMAD3-202ENST00000439724 NR1D1P20393 614 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CD52P31358 61 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 VPS41P49754 854 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 OTUD4Q01804 1114 aaKnown RBP12.32□□□□□ -0.44
SMAD3-202ENST00000439724 ITGA7Q13683 1181 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 SLC29A2Q14542 456 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 RNF180Q86T96 592 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 RFX6Q8HWS3 928 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 SCUBE3Q8IX30 993 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 FUKQ8N0W3 1084 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 HSPH1Q92598 858 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 LPPQ93052 612 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 HAUS1Q96CS2 278 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 SENP8Q96LD8 212 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CFAP57Q96MR6 1250 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 DUSP16Q9BY84 665 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 B3GNT5Q9BYG0 378 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CDC42EP4Q9H3Q1 356 aaKnown RBP12.32□□□□□ -0.44
SMAD3-202ENST00000439724 MIOSQ9NXC5 875 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 TDRD15B5MCY1 1934 aaKnown RBP12.32□□□□□ -0.44
SMAD3-202ENST00000439724 ZNF487B1APH4 448 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 MDM4O15151 490 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 MGEA5O60502 916 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 SHBGP04278 402 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 GHRP10912 638 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CHKAP35790 457 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 LHX1P48742 406 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 SCNN1GP51170 649 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 ACLYP53396 1101 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CDH6P55285 790 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 DYNLT1P63172 113 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 TFDP2Q14188 446 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 DPYSL3Q14195 570 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 LPIN1Q14693 890 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CDO1Q16878 200 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms